Gene : Solyc10g009620.1 S. lycopersicum ITAG2.4
Defline:  (1 of 8) K14506 - jasmonic acid-amino synthetase (JAR1) Description:  GH3 family protein (AHRD V1 ***- B9GQG9_POPTR); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter
Genomic Order:  460 Name:  ? Solyc10g009620.1
Secondary Identifier:  ? PAC:36155597
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g009620.1 0.5kb upstream 0.5kb upstream 3025 true SL2.50ch10: 3760899-3763923 Solanum lycopersicum
Solyc10g009620.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 3763424-3763923 Solanum lycopersicum
Solyc10g009620.1 0.5kb downstream 0.5kb downstream 3025 true SL2.50ch10: 3760399-3763423 Solanum lycopersicum
Solyc10g009620.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 3760399-3760898 Solanum lycopersicum
Solyc10g009620.1 1.0kb upstream 1.0kb upstream 3525 true SL2.50ch10: 3760899-3764423 Solanum lycopersicum
Solyc10g009620.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 3763424-3764423 Solanum lycopersicum
Solyc10g009620.1 1.0kb downstream 1.0kb downstream 3525 true SL2.50ch10: 3759899-3763423 Solanum lycopersicum
Solyc10g009620.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 3759899-3760898 Solanum lycopersicum
Solyc10g009620.1 2.0kb upstream 2.0kb upstream 4525 true SL2.50ch10: 3760899-3765423 Solanum lycopersicum
Solyc10g009620.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 3763424-3765423 Solanum lycopersicum
Solyc10g009620.1 2.0kb downstream 2.0kb downstream 4525 true SL2.50ch10: 3758899-3763423 Solanum lycopersicum
Solyc10g009620.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 3758899-3760898 Solanum lycopersicum
Solyc10g009620.1 5.0kb upstream 5.0kb upstream 7525 true SL2.50ch10: 3760899-3768423 Solanum lycopersicum
Solyc10g009620.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 3763424-3768423 Solanum lycopersicum
Solyc10g009620.1 5.0kb downstream 5.0kb downstream 7525 true SL2.50ch10: 3755899-3763423 Solanum lycopersicum
Solyc10g009620.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 3755899-3760898 Solanum lycopersicum
Solyc10g009620.1 10.0kb upstream 10.0kb upstream 12525 true SL2.50ch10: 3760899-3773423 Solanum lycopersicum
Solyc10g009620.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 3763424-3773423 Solanum lycopersicum
Solyc10g009620.1 10.0kb downstream 10.0kb downstream 12525 true SL2.50ch10: 3750899-3763423 Solanum lycopersicum
Solyc10g009620.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 3750899-3760898 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478029 5263 Asterids View MSA
123741688 5271 Pentapetalae View MSA
122793518 5272 Eudicot View MSA
122043357 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain