Gene : Solyc10g009640.1 S. lycopersicum ITAG2.4
Defline:  (1 of 8) K14506 - jasmonic acid-amino synthetase (JAR1) Description:  GH3 family protein (AHRD V1 ***- B9GQG9_POPTR); contains Interpro domain(s) IPR004993 GH3 auxin-responsive promoter
Genomic Order:  462 Name:  ? Solyc10g009640.1
Secondary Identifier:  ? PAC:36155991
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g009640.1 0.5kb upstream 0.5kb upstream 3137 true SL2.50ch10: 3834576-3837712 Solanum lycopersicum
Solyc10g009640.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 3837213-3837712 Solanum lycopersicum
Solyc10g009640.1 0.5kb downstream 0.5kb downstream 3137 true SL2.50ch10: 3834076-3837212 Solanum lycopersicum
Solyc10g009640.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 3834076-3834575 Solanum lycopersicum
Solyc10g009640.1 1.0kb upstream 1.0kb upstream 3637 true SL2.50ch10: 3834576-3838212 Solanum lycopersicum
Solyc10g009640.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 3837213-3838212 Solanum lycopersicum
Solyc10g009640.1 1.0kb downstream 1.0kb downstream 3637 true SL2.50ch10: 3833576-3837212 Solanum lycopersicum
Solyc10g009640.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 3833576-3834575 Solanum lycopersicum
Solyc10g009640.1 2.0kb upstream 2.0kb upstream 4637 true SL2.50ch10: 3834576-3839212 Solanum lycopersicum
Solyc10g009640.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 3837213-3839212 Solanum lycopersicum
Solyc10g009640.1 2.0kb downstream 2.0kb downstream 4637 true SL2.50ch10: 3832576-3837212 Solanum lycopersicum
Solyc10g009640.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 3832576-3834575 Solanum lycopersicum
Solyc10g009640.1 5.0kb upstream 5.0kb upstream 7637 true SL2.50ch10: 3834576-3842212 Solanum lycopersicum
Solyc10g009640.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 3837213-3842212 Solanum lycopersicum
Solyc10g009640.1 5.0kb downstream 5.0kb downstream 7637 true SL2.50ch10: 3829576-3837212 Solanum lycopersicum
Solyc10g009640.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 3829576-3834575 Solanum lycopersicum
Solyc10g009640.1 10.0kb upstream 10.0kb upstream 12637 true SL2.50ch10: 3834576-3847212 Solanum lycopersicum
Solyc10g009640.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 3837213-3847212 Solanum lycopersicum
Solyc10g009640.1 10.0kb downstream 10.0kb downstream 12637 true SL2.50ch10: 3824576-3837212 Solanum lycopersicum
Solyc10g009640.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 3824576-3834575 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478029 5263 Asterids View MSA
123741688 5271 Pentapetalae View MSA
122793518 5272 Eudicot View MSA
122043357 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain