Gene : Solyc10g009030.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K04712 - sphingolipid delta-4 desaturase (DEGS) Description:  Sphingolipid delta 4 desaturase (AHRD V1 **** Q5AJX2_CANAL); contains Interpro domain(s) IPR011388 Sphingolipid delta4-desaturase IPR006025 Peptidase M, neutral zinc metallopeptidases, zinc-binding site
Genomic Order:  401 Name:  ? Solyc10g009030.2
Secondary Identifier:  ? PAC:36154159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g009030.2 0.5kb upstream 0.5kb upstream 3244 true SL2.50ch10: 3055858-3059101 Solanum lycopersicum
Solyc10g009030.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 3055858-3056357 Solanum lycopersicum
Solyc10g009030.2 0.5kb downstream 0.5kb downstream 3244 true SL2.50ch10: 3056358-3059601 Solanum lycopersicum
Solyc10g009030.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 3059102-3059601 Solanum lycopersicum
Solyc10g009030.2 1.0kb upstream 1.0kb upstream 3744 true SL2.50ch10: 3055358-3059101 Solanum lycopersicum
Solyc10g009030.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 3055358-3056357 Solanum lycopersicum
Solyc10g009030.2 1.0kb downstream 1.0kb downstream 3744 true SL2.50ch10: 3056358-3060101 Solanum lycopersicum
Solyc10g009030.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 3059102-3060101 Solanum lycopersicum
Solyc10g009030.2 2.0kb upstream 2.0kb upstream 4744 true SL2.50ch10: 3054358-3059101 Solanum lycopersicum
Solyc10g009030.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 3054358-3056357 Solanum lycopersicum
Solyc10g009030.2 2.0kb downstream 2.0kb downstream 4744 true SL2.50ch10: 3056358-3061101 Solanum lycopersicum
Solyc10g009030.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 3059102-3061101 Solanum lycopersicum
Solyc10g009030.2 5.0kb upstream 5.0kb upstream 7744 true SL2.50ch10: 3051358-3059101 Solanum lycopersicum
Solyc10g009030.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 3051358-3056357 Solanum lycopersicum
Solyc10g009030.2 5.0kb downstream 5.0kb downstream 7744 true SL2.50ch10: 3056358-3064101 Solanum lycopersicum
Solyc10g009030.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 3059102-3064101 Solanum lycopersicum
Solyc10g009030.2 10.0kb upstream 10.0kb upstream 12744 true SL2.50ch10: 3046358-3059101 Solanum lycopersicum
Solyc10g009030.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 3046358-3056357 Solanum lycopersicum
Solyc10g009030.2 10.0kb downstream 10.0kb downstream 12744 true SL2.50ch10: 3056358-3069101 Solanum lycopersicum
Solyc10g009030.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 3059102-3069101 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469110 5263 Asterids View MSA
123741944 5271 Pentapetalae View MSA
122796748 5272 Eudicot View MSA
122048709 5273 Angiosperm View MSA
121348431 5274 Embryophyte View MSA
123425717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain