Gene : Solyc10g039190.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14556 - U3 small nucleolar RNA-associated protein 12 (DIP2, UTP12, WDR3) Description:  WD-repeat-containing protein (AHRD V1 **-- A8NX65_COPC7); contains Interpro domain(s) IPR007148 Small-subunit processome, Utp12
Genomic Order:  815 Name:  ? Solyc10g039190.1
Secondary Identifier:  ? PAC:36154538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g039190.1 0.5kb upstream 0.5kb upstream 8159 true SL2.50ch10: 20778109-20786267 Solanum lycopersicum
Solyc10g039190.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 20778109-20778608 Solanum lycopersicum
Solyc10g039190.1 0.5kb downstream 0.5kb downstream 8159 true SL2.50ch10: 20778609-20786767 Solanum lycopersicum
Solyc10g039190.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 20786268-20786767 Solanum lycopersicum
Solyc10g039190.1 1.0kb upstream 1.0kb upstream 8659 true SL2.50ch10: 20777609-20786267 Solanum lycopersicum
Solyc10g039190.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 20777609-20778608 Solanum lycopersicum
Solyc10g039190.1 1.0kb downstream 1.0kb downstream 8659 true SL2.50ch10: 20778609-20787267 Solanum lycopersicum
Solyc10g039190.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 20786268-20787267 Solanum lycopersicum
Solyc10g039190.1 2.0kb upstream 2.0kb upstream 9659 true SL2.50ch10: 20776609-20786267 Solanum lycopersicum
Solyc10g039190.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 20776609-20778608 Solanum lycopersicum
Solyc10g039190.1 2.0kb downstream 2.0kb downstream 9659 true SL2.50ch10: 20778609-20788267 Solanum lycopersicum
Solyc10g039190.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 20786268-20788267 Solanum lycopersicum
Solyc10g039190.1 5.0kb upstream 5.0kb upstream 12659 true SL2.50ch10: 20773609-20786267 Solanum lycopersicum
Solyc10g039190.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 20773609-20778608 Solanum lycopersicum
Solyc10g039190.1 5.0kb downstream 5.0kb downstream 12659 true SL2.50ch10: 20778609-20791267 Solanum lycopersicum
Solyc10g039190.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 20786268-20791267 Solanum lycopersicum
Solyc10g039190.1 10.0kb upstream 10.0kb upstream 17659 true SL2.50ch10: 20768609-20786267 Solanum lycopersicum
Solyc10g039190.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 20768609-20778608 Solanum lycopersicum
Solyc10g039190.1 10.0kb downstream 10.0kb downstream 17659 true SL2.50ch10: 20778609-20796267 Solanum lycopersicum
Solyc10g039190.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 20786268-20796267 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471901 5263 Asterids View MSA
123739283 5271 Pentapetalae View MSA
122787451 5272 Eudicot View MSA
122046155 5273 Angiosperm View MSA
121346306 5274 Embryophyte View MSA
123424601 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain