Gene : Solyc10g017950.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR34971:SF2 - PHOTOSYSTEM II REACTION CENTER PROTEIN Z Description:  Photosystem II reaction center protein Z (AHRD V1 ***- Q5IHA1_9SOLN); contains Interpro domain(s) IPR002644 Photosystem II protein PsbZ
Genomic Order:  591 Name:  ? Solyc10g017950.1
Secondary Identifier:  ? PAC:36155458
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g017950.1 0.5kb upstream 0.5kb upstream 689 true SL2.50ch10: 6185838-6186526 Solanum lycopersicum
Solyc10g017950.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 6185838-6186337 Solanum lycopersicum
Solyc10g017950.1 0.5kb downstream 0.5kb downstream 689 true SL2.50ch10: 6186338-6187026 Solanum lycopersicum
Solyc10g017950.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 6186527-6187026 Solanum lycopersicum
Solyc10g017950.1 1.0kb upstream 1.0kb upstream 1189 true SL2.50ch10: 6185338-6186526 Solanum lycopersicum
Solyc10g017950.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 6185338-6186337 Solanum lycopersicum
Solyc10g017950.1 1.0kb downstream 1.0kb downstream 1189 true SL2.50ch10: 6186338-6187526 Solanum lycopersicum
Solyc10g017950.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 6186527-6187526 Solanum lycopersicum
Solyc10g017950.1 2.0kb upstream 2.0kb upstream 2189 true SL2.50ch10: 6184338-6186526 Solanum lycopersicum
Solyc10g017950.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 6184338-6186337 Solanum lycopersicum
Solyc10g017950.1 2.0kb downstream 2.0kb downstream 2189 true SL2.50ch10: 6186338-6188526 Solanum lycopersicum
Solyc10g017950.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 6186527-6188526 Solanum lycopersicum
Solyc10g017950.1 5.0kb upstream 5.0kb upstream 5189 true SL2.50ch10: 6181338-6186526 Solanum lycopersicum
Solyc10g017950.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 6181338-6186337 Solanum lycopersicum
Solyc10g017950.1 5.0kb downstream 5.0kb downstream 5189 true SL2.50ch10: 6186338-6191526 Solanum lycopersicum
Solyc10g017950.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 6186527-6191526 Solanum lycopersicum
Solyc10g017950.1 10.0kb upstream 10.0kb upstream 10189 true SL2.50ch10: 6176338-6186526 Solanum lycopersicum
Solyc10g017950.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 6176338-6186337 Solanum lycopersicum
Solyc10g017950.1 10.0kb downstream 10.0kb downstream 10189 true SL2.50ch10: 6186338-6196526 Solanum lycopersicum
Solyc10g017950.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 6186527-6196526 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028507 5273 Angiosperm View MSA
121482782 5263 Asterids View MSA
123752030 5271 Pentapetalae View MSA
122774318 5272 Eudicot View MSA
121349923 5274 Embryophyte View MSA
123381503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain