Gene : Solyc10g018750.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) 3.4.24.12 - Envelysin / Sea-urchin-hatching proteinase Description:  Matrix metalloproteinase (AHRD V1 **-- D7LBU9_ARALY); contains Interpro domain(s) IPR001818 Peptidase M10A and M12B, matrixin and adamalysin
Genomic Order:  668 Name:  ? Solyc10g018750.1
Secondary Identifier:  ? PAC:36154399
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g018750.1 0.5kb upstream 0.5kb upstream 983 true SL2.50ch10: 10155802-10156784 Solanum lycopersicum
Solyc10g018750.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 10156285-10156784 Solanum lycopersicum
Solyc10g018750.1 0.5kb downstream 0.5kb downstream 983 true SL2.50ch10: 10155302-10156284 Solanum lycopersicum
Solyc10g018750.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 10155302-10155801 Solanum lycopersicum
Solyc10g018750.1 1.0kb upstream 1.0kb upstream 1483 true SL2.50ch10: 10155802-10157284 Solanum lycopersicum
Solyc10g018750.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 10156285-10157284 Solanum lycopersicum
Solyc10g018750.1 1.0kb downstream 1.0kb downstream 1483 true SL2.50ch10: 10154802-10156284 Solanum lycopersicum
Solyc10g018750.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 10154802-10155801 Solanum lycopersicum
Solyc10g018750.1 2.0kb upstream 2.0kb upstream 2483 true SL2.50ch10: 10155802-10158284 Solanum lycopersicum
Solyc10g018750.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 10156285-10158284 Solanum lycopersicum
Solyc10g018750.1 2.0kb downstream 2.0kb downstream 2483 true SL2.50ch10: 10153802-10156284 Solanum lycopersicum
Solyc10g018750.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 10153802-10155801 Solanum lycopersicum
Solyc10g018750.1 5.0kb upstream 5.0kb upstream 5483 true SL2.50ch10: 10155802-10161284 Solanum lycopersicum
Solyc10g018750.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 10156285-10161284 Solanum lycopersicum
Solyc10g018750.1 5.0kb downstream 5.0kb downstream 5483 true SL2.50ch10: 10150802-10156284 Solanum lycopersicum
Solyc10g018750.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 10150802-10155801 Solanum lycopersicum
Solyc10g018750.1 10.0kb upstream 10.0kb upstream 10483 true SL2.50ch10: 10155802-10166284 Solanum lycopersicum
Solyc10g018750.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 10156285-10166284 Solanum lycopersicum
Solyc10g018750.1 10.0kb downstream 10.0kb downstream 10483 true SL2.50ch10: 10145802-10156284 Solanum lycopersicum
Solyc10g018750.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 10145802-10155801 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
121480110 5263 Asterids View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain