Gene : Solyc10g006490.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Description:  Trafficking protein particle complex subunit 3 (AHRD V1 ***- B6T6G9_MAIZE); contains Interpro domain(s) IPR016721 TRAPP I complex, Bet3
Genomic Order:  149 Name:  ? Solyc10g006490.2
Secondary Identifier:  ? PAC:36155328
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g006490.2 0.5kb upstream 0.5kb upstream 4566 true SL2.50ch10: 1075050-1079615 Solanum lycopersicum
Solyc10g006490.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 1075050-1075549 Solanum lycopersicum
Solyc10g006490.2 0.5kb downstream 0.5kb downstream 4566 true SL2.50ch10: 1075550-1080115 Solanum lycopersicum
Solyc10g006490.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 1079616-1080115 Solanum lycopersicum
Solyc10g006490.2 1.0kb upstream 1.0kb upstream 5066 true SL2.50ch10: 1074550-1079615 Solanum lycopersicum
Solyc10g006490.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 1074550-1075549 Solanum lycopersicum
Solyc10g006490.2 1.0kb downstream 1.0kb downstream 5066 true SL2.50ch10: 1075550-1080615 Solanum lycopersicum
Solyc10g006490.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 1079616-1080615 Solanum lycopersicum
Solyc10g006490.2 2.0kb upstream 2.0kb upstream 6066 true SL2.50ch10: 1073550-1079615 Solanum lycopersicum
Solyc10g006490.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 1073550-1075549 Solanum lycopersicum
Solyc10g006490.2 2.0kb downstream 2.0kb downstream 6066 true SL2.50ch10: 1075550-1081615 Solanum lycopersicum
Solyc10g006490.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 1079616-1081615 Solanum lycopersicum
Solyc10g006490.2 5.0kb upstream 5.0kb upstream 9066 true SL2.50ch10: 1070550-1079615 Solanum lycopersicum
Solyc10g006490.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 1070550-1075549 Solanum lycopersicum
Solyc10g006490.2 5.0kb downstream 5.0kb downstream 9066 true SL2.50ch10: 1075550-1084615 Solanum lycopersicum
Solyc10g006490.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 1079616-1084615 Solanum lycopersicum
Solyc10g006490.2 10.0kb upstream 10.0kb upstream 14066 true SL2.50ch10: 1065550-1079615 Solanum lycopersicum
Solyc10g006490.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 1065550-1075549 Solanum lycopersicum
Solyc10g006490.2 10.0kb downstream 10.0kb downstream 14066 true SL2.50ch10: 1075550-1089615 Solanum lycopersicum
Solyc10g006490.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 1079616-1089615 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479698 5263 Asterids View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain