Gene : Solyc10g006380.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR24073:SF515 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSD21 Description:  Ras-related protein Rab-21 (AHRD V1 *-*- C1BQH4_9MAXI); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type
Genomic Order:  138 Name:  ? Solyc10g006380.1
Secondary Identifier:  ? PAC:36154593
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g006380.1 0.5kb upstream 0.5kb upstream 3956 true SL2.50ch10: 998478-1002433 Solanum lycopersicum
Solyc10g006380.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 998478-998977 Solanum lycopersicum
Solyc10g006380.1 0.5kb downstream 0.5kb downstream 3956 true SL2.50ch10: 998978-1002933 Solanum lycopersicum
Solyc10g006380.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 1002434-1002933 Solanum lycopersicum
Solyc10g006380.1 1.0kb upstream 1.0kb upstream 4456 true SL2.50ch10: 997978-1002433 Solanum lycopersicum
Solyc10g006380.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 997978-998977 Solanum lycopersicum
Solyc10g006380.1 1.0kb downstream 1.0kb downstream 4456 true SL2.50ch10: 998978-1003433 Solanum lycopersicum
Solyc10g006380.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 1002434-1003433 Solanum lycopersicum
Solyc10g006380.1 2.0kb upstream 2.0kb upstream 5456 true SL2.50ch10: 996978-1002433 Solanum lycopersicum
Solyc10g006380.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 996978-998977 Solanum lycopersicum
Solyc10g006380.1 2.0kb downstream 2.0kb downstream 5456 true SL2.50ch10: 998978-1004433 Solanum lycopersicum
Solyc10g006380.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 1002434-1004433 Solanum lycopersicum
Solyc10g006380.1 5.0kb upstream 5.0kb upstream 8456 true SL2.50ch10: 993978-1002433 Solanum lycopersicum
Solyc10g006380.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 993978-998977 Solanum lycopersicum
Solyc10g006380.1 5.0kb downstream 5.0kb downstream 8456 true SL2.50ch10: 998978-1007433 Solanum lycopersicum
Solyc10g006380.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 1002434-1007433 Solanum lycopersicum
Solyc10g006380.1 10.0kb upstream 10.0kb upstream 13456 true SL2.50ch10: 988978-1002433 Solanum lycopersicum
Solyc10g006380.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 988978-998977 Solanum lycopersicum
Solyc10g006380.1 10.0kb downstream 10.0kb downstream 13456 true SL2.50ch10: 998978-1012433 Solanum lycopersicum
Solyc10g006380.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 1002434-1012433 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029161 5273 Angiosperm View MSA
121389185 5263 Asterids View MSA
123753329 5271 Pentapetalae View MSA
122789157 5272 Eudicot View MSA
121298542 5274 Embryophyte View MSA
123336508 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain