Gene : Solyc10g006290.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 3.5.99.10 - 2-iminobutanoate/2-iminopropanoate deaminase / Enamine/imine deaminase Description:  Endoribonuclease L-PSP family protein (AHRD V1 **-* D7LAZ0_ARALY); contains Interpro domain(s) IPR019897 YjgF-like protein, conserved site
Genomic Order:  129 Name:  ? Solyc10g006290.2
Secondary Identifier:  ? PAC:36155129
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY0-1535 Solanum lycopersicum pathologic  
Slycopersicum PWY-6196 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g006290.2 0.5kb upstream 0.5kb upstream 3668 true SL2.50ch10: 946416-950083 Solanum lycopersicum
Solyc10g006290.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 946416-946915 Solanum lycopersicum
Solyc10g006290.2 0.5kb downstream 0.5kb downstream 3668 true SL2.50ch10: 946916-950583 Solanum lycopersicum
Solyc10g006290.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 950084-950583 Solanum lycopersicum
Solyc10g006290.2 1.0kb upstream 1.0kb upstream 4168 true SL2.50ch10: 945916-950083 Solanum lycopersicum
Solyc10g006290.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 945916-946915 Solanum lycopersicum
Solyc10g006290.2 1.0kb downstream 1.0kb downstream 4168 true SL2.50ch10: 946916-951083 Solanum lycopersicum
Solyc10g006290.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 950084-951083 Solanum lycopersicum
Solyc10g006290.2 2.0kb upstream 2.0kb upstream 5168 true SL2.50ch10: 944916-950083 Solanum lycopersicum
Solyc10g006290.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 944916-946915 Solanum lycopersicum
Solyc10g006290.2 2.0kb downstream 2.0kb downstream 5168 true SL2.50ch10: 946916-952083 Solanum lycopersicum
Solyc10g006290.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 950084-952083 Solanum lycopersicum
Solyc10g006290.2 5.0kb upstream 5.0kb upstream 8168 true SL2.50ch10: 941916-950083 Solanum lycopersicum
Solyc10g006290.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 941916-946915 Solanum lycopersicum
Solyc10g006290.2 5.0kb downstream 5.0kb downstream 8168 true SL2.50ch10: 946916-955083 Solanum lycopersicum
Solyc10g006290.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 950084-955083 Solanum lycopersicum
Solyc10g006290.2 10.0kb upstream 10.0kb upstream 13168 true SL2.50ch10: 936916-950083 Solanum lycopersicum
Solyc10g006290.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 936916-946915 Solanum lycopersicum
Solyc10g006290.2 10.0kb downstream 10.0kb downstream 13168 true SL2.50ch10: 946916-960083 Solanum lycopersicum
Solyc10g006290.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 950084-960083 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469867 5263 Asterids View MSA
123747425 5271 Pentapetalae View MSA
122788697 5272 Eudicot View MSA
122047773 5273 Angiosperm View MSA
121349412 5274 Embryophyte View MSA
123426885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain