Gene : Solyc10g005510.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10836:SF41 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC-RELATED Description:  Glyceraldehyde-3-phosphate dehydrogenase (AHRD V1 **** Q8VWN9_CAPAN); contains Interpro domain(s) IPR000173 Glyceraldehyde 3-phosphate dehydrogenase
Genomic Order:  51 Name:  ? Solyc10g005510.2
Secondary Identifier:  ? PAC:36156439
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum ANAEROFRUCAT-PWY Solanum lycopersicum pathologic  
Slycopersicum ANAGLYCOLYSIS-PWY Solanum lycopersicum pathologic  
Slycopersicum GLUCONEO-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-1042 Solanum lycopersicum pathologic  
Slycopersicum PWY-5464 Solanum lycopersicum pathologic  
Slycopersicum SUCSYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g005510.2 0.5kb upstream 0.5kb upstream 6145 true SL2.50ch10: 417823-423967 Solanum lycopersicum
Solyc10g005510.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 423468-423967 Solanum lycopersicum
Solyc10g005510.2 0.5kb downstream 0.5kb downstream 6145 true SL2.50ch10: 417323-423467 Solanum lycopersicum
Solyc10g005510.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 417323-417822 Solanum lycopersicum
Solyc10g005510.2 1.0kb upstream 1.0kb upstream 6645 true SL2.50ch10: 417823-424467 Solanum lycopersicum
Solyc10g005510.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 423468-424467 Solanum lycopersicum
Solyc10g005510.2 1.0kb downstream 1.0kb downstream 6645 true SL2.50ch10: 416823-423467 Solanum lycopersicum
Solyc10g005510.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 416823-417822 Solanum lycopersicum
Solyc10g005510.2 2.0kb upstream 2.0kb upstream 7645 true SL2.50ch10: 417823-425467 Solanum lycopersicum
Solyc10g005510.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 423468-425467 Solanum lycopersicum
Solyc10g005510.2 2.0kb downstream 2.0kb downstream 7645 true SL2.50ch10: 415823-423467 Solanum lycopersicum
Solyc10g005510.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 415823-417822 Solanum lycopersicum
Solyc10g005510.2 5.0kb upstream 5.0kb upstream 10645 true SL2.50ch10: 417823-428467 Solanum lycopersicum
Solyc10g005510.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 423468-428467 Solanum lycopersicum
Solyc10g005510.2 5.0kb downstream 5.0kb downstream 10645 true SL2.50ch10: 412823-423467 Solanum lycopersicum
Solyc10g005510.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 412823-417822 Solanum lycopersicum
Solyc10g005510.2 10.0kb upstream 10.0kb upstream 15645 true SL2.50ch10: 417823-433467 Solanum lycopersicum
Solyc10g005510.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 423468-433467 Solanum lycopersicum
Solyc10g005510.2 10.0kb downstream 10.0kb downstream 15645 true SL2.50ch10: 407823-423467 Solanum lycopersicum
Solyc10g005510.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 407823-417822 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468914 5263 Asterids View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain