Gene : Solyc10g005780.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR12941 - ER MEMBRANE PROTEIN COMPLEX Description:  Neighbor of COX4 (AHRD V1 ***- D3PHS4_9MAXI); contains Interpro domain(s) IPR005366 Uncharacterised protein family UPF0172
Genomic Order:  78 Name:  ? Solyc10g005780.2
Secondary Identifier:  ? PAC:36154846
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g005780.2 0.5kb upstream 0.5kb upstream 4362 true SL2.50ch10: 623550-627911 Solanum lycopersicum
Solyc10g005780.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 627412-627911 Solanum lycopersicum
Solyc10g005780.2 0.5kb downstream 0.5kb downstream 4362 true SL2.50ch10: 623050-627411 Solanum lycopersicum
Solyc10g005780.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 623050-623549 Solanum lycopersicum
Solyc10g005780.2 1.0kb upstream 1.0kb upstream 4862 true SL2.50ch10: 623550-628411 Solanum lycopersicum
Solyc10g005780.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 627412-628411 Solanum lycopersicum
Solyc10g005780.2 1.0kb downstream 1.0kb downstream 4862 true SL2.50ch10: 622550-627411 Solanum lycopersicum
Solyc10g005780.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 622550-623549 Solanum lycopersicum
Solyc10g005780.2 2.0kb upstream 2.0kb upstream 5862 true SL2.50ch10: 623550-629411 Solanum lycopersicum
Solyc10g005780.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 627412-629411 Solanum lycopersicum
Solyc10g005780.2 2.0kb downstream 2.0kb downstream 5862 true SL2.50ch10: 621550-627411 Solanum lycopersicum
Solyc10g005780.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 621550-623549 Solanum lycopersicum
Solyc10g005780.2 5.0kb upstream 5.0kb upstream 8862 true SL2.50ch10: 623550-632411 Solanum lycopersicum
Solyc10g005780.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 627412-632411 Solanum lycopersicum
Solyc10g005780.2 5.0kb downstream 5.0kb downstream 8862 true SL2.50ch10: 618550-627411 Solanum lycopersicum
Solyc10g005780.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 618550-623549 Solanum lycopersicum
Solyc10g005780.2 10.0kb upstream 10.0kb upstream 13862 true SL2.50ch10: 623550-637411 Solanum lycopersicum
Solyc10g005780.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 627412-637411 Solanum lycopersicum
Solyc10g005780.2 10.0kb downstream 10.0kb downstream 13862 true SL2.50ch10: 613550-627411 Solanum lycopersicum
Solyc10g005780.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 613550-623549 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477391 5263 Asterids View MSA
123743483 5271 Pentapetalae View MSA
122794438 5272 Eudicot View MSA
122048764 5273 Angiosperm View MSA
121351513 5274 Embryophyte View MSA
123425734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain