Gene : Solyc10g008250.1 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PTHR13935//PTHR13935:SF59 - ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Genomic Order:  323 Name:  ? Solyc10g008250.1
Secondary Identifier:  ? PAC:36155288
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g008250.1 0.5kb upstream 0.5kb upstream 1914 true SL2.50ch10: 2368847-2370760 Solanum lycopersicum
Solyc10g008250.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 2370261-2370760 Solanum lycopersicum
Solyc10g008250.1 0.5kb downstream 0.5kb downstream 1914 true SL2.50ch10: 2368347-2370260 Solanum lycopersicum
Solyc10g008250.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 2368347-2368846 Solanum lycopersicum
Solyc10g008250.1 1.0kb upstream 1.0kb upstream 2414 true SL2.50ch10: 2368847-2371260 Solanum lycopersicum
Solyc10g008250.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 2370261-2371260 Solanum lycopersicum
Solyc10g008250.1 1.0kb downstream 1.0kb downstream 2414 true SL2.50ch10: 2367847-2370260 Solanum lycopersicum
Solyc10g008250.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 2367847-2368846 Solanum lycopersicum
Solyc10g008250.1 2.0kb upstream 2.0kb upstream 3414 true SL2.50ch10: 2368847-2372260 Solanum lycopersicum
Solyc10g008250.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 2370261-2372260 Solanum lycopersicum
Solyc10g008250.1 2.0kb downstream 2.0kb downstream 3414 true SL2.50ch10: 2366847-2370260 Solanum lycopersicum
Solyc10g008250.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 2366847-2368846 Solanum lycopersicum
Solyc10g008250.1 5.0kb upstream 5.0kb upstream 6414 true SL2.50ch10: 2368847-2375260 Solanum lycopersicum
Solyc10g008250.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 2370261-2375260 Solanum lycopersicum
Solyc10g008250.1 5.0kb downstream 5.0kb downstream 6414 true SL2.50ch10: 2363847-2370260 Solanum lycopersicum
Solyc10g008250.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 2363847-2368846 Solanum lycopersicum
Solyc10g008250.1 10.0kb upstream 10.0kb upstream 11414 true SL2.50ch10: 2368847-2380260 Solanum lycopersicum
Solyc10g008250.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 2370261-2380260 Solanum lycopersicum
Solyc10g008250.1 10.0kb downstream 10.0kb downstream 11414 true SL2.50ch10: 2358847-2370260 Solanum lycopersicum
Solyc10g008250.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 2358847-2368846 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
121473473 5263 Asterids View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain