Gene : Solyc10g006990.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K03514 - non-canonical poly(A) RNA polymerase PAPD5/7 (PAPD5_7, TRF4) Description:  Poly(A) RNA polymerase protein 1 (AHRD V1 **-- TRF5_YEAST); contains Interpro domain(s) IPR002934 Nucleotidyltransferase
Genomic Order:  199 Name:  ? Solyc10g006990.2
Secondary Identifier:  ? PAC:36155855
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g006990.2 0.5kb upstream 0.5kb upstream 8401 true SL2.50ch10: 1395368-1403768 Solanum lycopersicum
Solyc10g006990.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 1403269-1403768 Solanum lycopersicum
Solyc10g006990.2 0.5kb downstream 0.5kb downstream 8401 true SL2.50ch10: 1394868-1403268 Solanum lycopersicum
Solyc10g006990.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 1394868-1395367 Solanum lycopersicum
Solyc10g006990.2 1.0kb upstream 1.0kb upstream 8901 true SL2.50ch10: 1395368-1404268 Solanum lycopersicum
Solyc10g006990.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 1403269-1404268 Solanum lycopersicum
Solyc10g006990.2 1.0kb downstream 1.0kb downstream 8901 true SL2.50ch10: 1394368-1403268 Solanum lycopersicum
Solyc10g006990.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 1394368-1395367 Solanum lycopersicum
Solyc10g006990.2 2.0kb upstream 2.0kb upstream 9901 true SL2.50ch10: 1395368-1405268 Solanum lycopersicum
Solyc10g006990.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 1403269-1405268 Solanum lycopersicum
Solyc10g006990.2 2.0kb downstream 2.0kb downstream 9901 true SL2.50ch10: 1393368-1403268 Solanum lycopersicum
Solyc10g006990.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 1393368-1395367 Solanum lycopersicum
Solyc10g006990.2 5.0kb upstream 5.0kb upstream 12901 true SL2.50ch10: 1395368-1408268 Solanum lycopersicum
Solyc10g006990.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 1403269-1408268 Solanum lycopersicum
Solyc10g006990.2 5.0kb downstream 5.0kb downstream 12901 true SL2.50ch10: 1390368-1403268 Solanum lycopersicum
Solyc10g006990.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 1390368-1395367 Solanum lycopersicum
Solyc10g006990.2 10.0kb upstream 10.0kb upstream 17901 true SL2.50ch10: 1395368-1413268 Solanum lycopersicum
Solyc10g006990.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 1403269-1413268 Solanum lycopersicum
Solyc10g006990.2 10.0kb downstream 10.0kb downstream 17901 true SL2.50ch10: 1385368-1403268 Solanum lycopersicum
Solyc10g006990.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 1385368-1395367 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041400 5273 Angiosperm View MSA
121474550 5263 Asterids View MSA
123752840 5271 Pentapetalae View MSA
122786418 5272 Eudicot View MSA
121348875 5274 Embryophyte View MSA
123428586 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain