Gene : Solyc10g007390.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K10956 - protein transport protein SEC61 subunit alpha (SEC61A) Description:  Protein transport protein SEC61 alpha subunit (AHRD V1 ***- D3B1K5_POLPA); contains Interpro domain(s) IPR002208 SecY protein
Genomic Order:  239 Name:  ? Solyc10g007390.2
Secondary Identifier:  ? PAC:36155094
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g007390.2 0.5kb upstream 0.5kb upstream 4504 true SL2.50ch10: 1761545-1766048 Solanum lycopersicum
Solyc10g007390.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 1765549-1766048 Solanum lycopersicum
Solyc10g007390.2 0.5kb downstream 0.5kb downstream 4504 true SL2.50ch10: 1761045-1765548 Solanum lycopersicum
Solyc10g007390.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 1761045-1761544 Solanum lycopersicum
Solyc10g007390.2 1.0kb upstream 1.0kb upstream 5004 true SL2.50ch10: 1761545-1766548 Solanum lycopersicum
Solyc10g007390.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 1765549-1766548 Solanum lycopersicum
Solyc10g007390.2 1.0kb downstream 1.0kb downstream 5004 true SL2.50ch10: 1760545-1765548 Solanum lycopersicum
Solyc10g007390.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 1760545-1761544 Solanum lycopersicum
Solyc10g007390.2 2.0kb upstream 2.0kb upstream 6004 true SL2.50ch10: 1761545-1767548 Solanum lycopersicum
Solyc10g007390.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 1765549-1767548 Solanum lycopersicum
Solyc10g007390.2 2.0kb downstream 2.0kb downstream 6004 true SL2.50ch10: 1759545-1765548 Solanum lycopersicum
Solyc10g007390.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 1759545-1761544 Solanum lycopersicum
Solyc10g007390.2 5.0kb upstream 5.0kb upstream 9004 true SL2.50ch10: 1761545-1770548 Solanum lycopersicum
Solyc10g007390.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 1765549-1770548 Solanum lycopersicum
Solyc10g007390.2 5.0kb downstream 5.0kb downstream 9004 true SL2.50ch10: 1756545-1765548 Solanum lycopersicum
Solyc10g007390.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 1756545-1761544 Solanum lycopersicum
Solyc10g007390.2 10.0kb upstream 10.0kb upstream 14004 true SL2.50ch10: 1761545-1775548 Solanum lycopersicum
Solyc10g007390.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 1765549-1775548 Solanum lycopersicum
Solyc10g007390.2 10.0kb downstream 10.0kb downstream 14004 true SL2.50ch10: 1751545-1765548 Solanum lycopersicum
Solyc10g007390.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 1751545-1761544 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473091 5263 Asterids View MSA
123743159 5271 Pentapetalae View MSA
122792380 5272 Eudicot View MSA
122043956 5273 Angiosperm View MSA
121349680 5274 Embryophyte View MSA
123426638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain