Gene : Solyc01g111070.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Description:  Chalcone synthase family protein (AHRD V1 ***- Q460V0_ARATH); contains Interpro domain(s) IPR011141 Polyketide synthase, type III
Genomic Order:  4157 Name:  ? Solyc01g111070.2
Secondary Identifier:  ? PAC:36138516
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g111070.2 0.5kb upstream 0.5kb upstream 2805 true SL2.50ch01: 97462125-97464929 Solanum lycopersicum
Solyc01g111070.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 97462125-97462624 Solanum lycopersicum
Solyc01g111070.2 0.5kb downstream 0.5kb downstream 2805 true SL2.50ch01: 97462625-97465429 Solanum lycopersicum
Solyc01g111070.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 97464930-97465429 Solanum lycopersicum
Solyc01g111070.2 1.0kb upstream 1.0kb upstream 3305 true SL2.50ch01: 97461625-97464929 Solanum lycopersicum
Solyc01g111070.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 97461625-97462624 Solanum lycopersicum
Solyc01g111070.2 1.0kb downstream 1.0kb downstream 3305 true SL2.50ch01: 97462625-97465929 Solanum lycopersicum
Solyc01g111070.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 97464930-97465929 Solanum lycopersicum
Solyc01g111070.2 2.0kb upstream 2.0kb upstream 4305 true SL2.50ch01: 97460625-97464929 Solanum lycopersicum
Solyc01g111070.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 97460625-97462624 Solanum lycopersicum
Solyc01g111070.2 2.0kb downstream 2.0kb downstream 4305 true SL2.50ch01: 97462625-97466929 Solanum lycopersicum
Solyc01g111070.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 97464930-97466929 Solanum lycopersicum
Solyc01g111070.2 5.0kb upstream 5.0kb upstream 7305 true SL2.50ch01: 97457625-97464929 Solanum lycopersicum
Solyc01g111070.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 97457625-97462624 Solanum lycopersicum
Solyc01g111070.2 5.0kb downstream 5.0kb downstream 7305 true SL2.50ch01: 97462625-97469929 Solanum lycopersicum
Solyc01g111070.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 97464930-97469929 Solanum lycopersicum
Solyc01g111070.2 10.0kb upstream 10.0kb upstream 12305 true SL2.50ch01: 97452625-97464929 Solanum lycopersicum
Solyc01g111070.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 97452625-97462624 Solanum lycopersicum
Solyc01g111070.2 10.0kb downstream 10.0kb downstream 12305 true SL2.50ch01: 97462625-97474929 Solanum lycopersicum
Solyc01g111070.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 97464930-97474929 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466855 5263 Asterids View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain