Gene : Solyc01g109830.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.1.1.45 - Thymidylate synthase Description:  Thymidylate synthase (AHRD V1 ***- D8LWN8_BLAHO); contains Interpro domain(s) IPR012262 Bifunctional dihydrofolate reductase/thymidylate synthase
Genomic Order:  4031 Name:  ? Solyc01g109830.2
Secondary Identifier:  ? PAC:36137596
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-3841 Solanum lycopersicum pathologic  
Slycopersicum PWY-6612 Solanum lycopersicum pathologic  
Slycopersicum PWY-6614 Solanum lycopersicum pathologic  
Slycopersicum PWY-7184 Solanum lycopersicum pathologic  
Slycopersicum PWY-7199 Solanum lycopersicum pathologic  
Slycopersicum PWY-7200 Solanum lycopersicum pathologic  
Slycopersicum PWY-7210 Solanum lycopersicum pathologic  
Slycopersicum PWY-7211 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g109830.2 0.5kb upstream 0.5kb upstream 4506 true SL2.50ch01: 96675182-96679687 Solanum lycopersicum
Solyc01g109830.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 96679188-96679687 Solanum lycopersicum
Solyc01g109830.2 0.5kb downstream 0.5kb downstream 4506 true SL2.50ch01: 96674682-96679187 Solanum lycopersicum
Solyc01g109830.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 96674682-96675181 Solanum lycopersicum
Solyc01g109830.2 1.0kb upstream 1.0kb upstream 5006 true SL2.50ch01: 96675182-96680187 Solanum lycopersicum
Solyc01g109830.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 96679188-96680187 Solanum lycopersicum
Solyc01g109830.2 1.0kb downstream 1.0kb downstream 5006 true SL2.50ch01: 96674182-96679187 Solanum lycopersicum
Solyc01g109830.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 96674182-96675181 Solanum lycopersicum
Solyc01g109830.2 2.0kb upstream 2.0kb upstream 6006 true SL2.50ch01: 96675182-96681187 Solanum lycopersicum
Solyc01g109830.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 96679188-96681187 Solanum lycopersicum
Solyc01g109830.2 2.0kb downstream 2.0kb downstream 6006 true SL2.50ch01: 96673182-96679187 Solanum lycopersicum
Solyc01g109830.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 96673182-96675181 Solanum lycopersicum
Solyc01g109830.2 5.0kb upstream 5.0kb upstream 9006 true SL2.50ch01: 96675182-96684187 Solanum lycopersicum
Solyc01g109830.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 96679188-96684187 Solanum lycopersicum
Solyc01g109830.2 5.0kb downstream 5.0kb downstream 9006 true SL2.50ch01: 96670182-96679187 Solanum lycopersicum
Solyc01g109830.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 96670182-96675181 Solanum lycopersicum
Solyc01g109830.2 10.0kb upstream 10.0kb upstream 14006 true SL2.50ch01: 96675182-96689187 Solanum lycopersicum
Solyc01g109830.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 96679188-96689187 Solanum lycopersicum
Solyc01g109830.2 10.0kb downstream 10.0kb downstream 14006 true SL2.50ch01: 96665182-96679187 Solanum lycopersicum
Solyc01g109830.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 96665182-96675181 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475112 5263 Asterids View MSA
123746183 5271 Pentapetalae View MSA
122795819 5272 Eudicot View MSA
122041907 5273 Angiosperm View MSA
121345404 5274 Embryophyte View MSA
123424391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain