Gene : Solyc01g112020.2 S. lycopersicum ITAG2.4
Defline:  (1 of 420) PF13041 - PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 *-*- D7MUM4_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  4250 Name:  ? Solyc01g112020.2
Secondary Identifier:  ? PAC:36139591
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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g112020.2 0.5kb upstream 0.5kb upstream 6741 true SL2.50ch01: 98145174-98151914 Solanum lycopersicum
Solyc01g112020.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 98151415-98151914 Solanum lycopersicum
Solyc01g112020.2 0.5kb downstream 0.5kb downstream 6741 true SL2.50ch01: 98144674-98151414 Solanum lycopersicum
Solyc01g112020.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 98144674-98145173 Solanum lycopersicum
Solyc01g112020.2 1.0kb upstream 1.0kb upstream 7241 true SL2.50ch01: 98145174-98152414 Solanum lycopersicum
Solyc01g112020.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 98151415-98152414 Solanum lycopersicum
Solyc01g112020.2 1.0kb downstream 1.0kb downstream 7241 true SL2.50ch01: 98144174-98151414 Solanum lycopersicum
Solyc01g112020.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 98144174-98145173 Solanum lycopersicum
Solyc01g112020.2 2.0kb upstream 2.0kb upstream 8241 true SL2.50ch01: 98145174-98153414 Solanum lycopersicum
Solyc01g112020.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 98151415-98153414 Solanum lycopersicum
Solyc01g112020.2 2.0kb downstream 2.0kb downstream 8241 true SL2.50ch01: 98143174-98151414 Solanum lycopersicum
Solyc01g112020.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 98143174-98145173 Solanum lycopersicum
Solyc01g112020.2 5.0kb upstream 5.0kb upstream 11241 true SL2.50ch01: 98145174-98156414 Solanum lycopersicum
Solyc01g112020.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 98151415-98156414 Solanum lycopersicum
Solyc01g112020.2 5.0kb downstream 5.0kb downstream 11241 true SL2.50ch01: 98140174-98151414 Solanum lycopersicum
Solyc01g112020.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 98140174-98145173 Solanum lycopersicum
Solyc01g112020.2 10.0kb upstream 10.0kb upstream 16241 true SL2.50ch01: 98145174-98161414 Solanum lycopersicum
Solyc01g112020.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 98151415-98161414 Solanum lycopersicum
Solyc01g112020.2 10.0kb downstream 10.0kb downstream 16241 true SL2.50ch01: 98135174-98151414 Solanum lycopersicum
Solyc01g112020.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 98135174-98145173 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476117 5263 Asterids View MSA
123737960 5271 Pentapetalae View MSA
122786713 5272 Eudicot View MSA
122046332 5273 Angiosperm View MSA
121347677 5274 Embryophyte View MSA
123426917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain