Gene : Solyc01g112280.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 3.5.1.14 - N-acyl-aliphatic-L-amino acid amidohydrolase / N-acyl-L-amino-acid amidohydrolase Description:  Succinyl-diaminopimelate desuccinylase (AHRD V1 **-- DAPE_MAGSA); contains Interpro domain(s) IPR010159 N-acyl-L-amino-acid amidohydrolase
Genomic Order:  4275 Name:  ? Solyc01g112280.2
Secondary Identifier:  ? PAC:36140812
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g112280.2 0.5kb upstream 0.5kb upstream 4219 true SL2.50ch01: 98344582-98348800 Solanum lycopersicum
Solyc01g112280.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 98348301-98348800 Solanum lycopersicum
Solyc01g112280.2 0.5kb downstream 0.5kb downstream 4219 true SL2.50ch01: 98344082-98348300 Solanum lycopersicum
Solyc01g112280.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 98344082-98344581 Solanum lycopersicum
Solyc01g112280.2 1.0kb upstream 1.0kb upstream 4719 true SL2.50ch01: 98344582-98349300 Solanum lycopersicum
Solyc01g112280.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 98348301-98349300 Solanum lycopersicum
Solyc01g112280.2 1.0kb downstream 1.0kb downstream 4719 true SL2.50ch01: 98343582-98348300 Solanum lycopersicum
Solyc01g112280.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 98343582-98344581 Solanum lycopersicum
Solyc01g112280.2 2.0kb upstream 2.0kb upstream 5719 true SL2.50ch01: 98344582-98350300 Solanum lycopersicum
Solyc01g112280.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 98348301-98350300 Solanum lycopersicum
Solyc01g112280.2 2.0kb downstream 2.0kb downstream 5719 true SL2.50ch01: 98342582-98348300 Solanum lycopersicum
Solyc01g112280.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 98342582-98344581 Solanum lycopersicum
Solyc01g112280.2 5.0kb upstream 5.0kb upstream 8719 true SL2.50ch01: 98344582-98353300 Solanum lycopersicum
Solyc01g112280.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 98348301-98353300 Solanum lycopersicum
Solyc01g112280.2 5.0kb downstream 5.0kb downstream 8719 true SL2.50ch01: 98339582-98348300 Solanum lycopersicum
Solyc01g112280.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 98339582-98344581 Solanum lycopersicum
Solyc01g112280.2 10.0kb upstream 10.0kb upstream 13719 true SL2.50ch01: 98344582-98358300 Solanum lycopersicum
Solyc01g112280.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 98348301-98358300 Solanum lycopersicum
Solyc01g112280.2 10.0kb downstream 10.0kb downstream 13719 true SL2.50ch01: 98334582-98348300 Solanum lycopersicum
Solyc01g112280.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 98334582-98344581 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470409 5263 Asterids View MSA
123738511 5271 Pentapetalae View MSA
122791484 5272 Eudicot View MSA
122048400 5273 Angiosperm View MSA
121346523 5274 Embryophyte View MSA
123427140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain