Gene : Solyc01g111440.2 S. lycopersicum ITAG2.4

Defline:  (1 of 5) PF06911 - Senescence-associated protein (Senescence) Description:  Senescence-associated protein 12 (AHRD V1 *-*- O81657_HEMSP); contains Interpro domain(s) IPR009686 Senescence-associated
Genomic Order:  4192 Name:  ? Solyc01g111440.2
Secondary Identifier:  ? PAC:36137702

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g111440.2 0.5kb upstream 0.5kb upstream 13856 true SL2.50ch01: 97679782-97693637 Solanum lycopersicum
Solyc01g111440.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 97679782-97680281 Solanum lycopersicum
Solyc01g111440.2 0.5kb downstream 0.5kb downstream 13856 true SL2.50ch01: 97680282-97694137 Solanum lycopersicum
Solyc01g111440.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 97693638-97694137 Solanum lycopersicum
Solyc01g111440.2 1.0kb upstream 1.0kb upstream 14356 true SL2.50ch01: 97679282-97693637 Solanum lycopersicum
Solyc01g111440.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 97679282-97680281 Solanum lycopersicum
Solyc01g111440.2 1.0kb downstream 1.0kb downstream 14356 true SL2.50ch01: 97680282-97694637 Solanum lycopersicum
Solyc01g111440.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 97693638-97694637 Solanum lycopersicum
Solyc01g111440.2 2.0kb upstream 2.0kb upstream 15356 true SL2.50ch01: 97678282-97693637 Solanum lycopersicum
Solyc01g111440.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 97678282-97680281 Solanum lycopersicum
Solyc01g111440.2 2.0kb downstream 2.0kb downstream 15356 true SL2.50ch01: 97680282-97695637 Solanum lycopersicum
Solyc01g111440.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 97693638-97695637 Solanum lycopersicum
Solyc01g111440.2 5.0kb upstream 5.0kb upstream 18356 true SL2.50ch01: 97675282-97693637 Solanum lycopersicum
Solyc01g111440.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 97675282-97680281 Solanum lycopersicum
Solyc01g111440.2 5.0kb downstream 5.0kb downstream 18356 true SL2.50ch01: 97680282-97698637 Solanum lycopersicum
Solyc01g111440.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 97693638-97698637 Solanum lycopersicum
Solyc01g111440.2 10.0kb upstream 10.0kb upstream 23356 true SL2.50ch01: 97670282-97693637 Solanum lycopersicum
Solyc01g111440.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 97670282-97680281 Solanum lycopersicum
Solyc01g111440.2 10.0kb downstream 10.0kb downstream 23356 true SL2.50ch01: 97680282-97703637 Solanum lycopersicum
Solyc01g111440.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 97693638-97703637 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475509 5263 Asterids View MSA
123750901 5271 Pentapetalae View MSA
122796418 5272 Eudicot View MSA
122046624 5273 Angiosperm View MSA
121350646 5274 Embryophyte View MSA
123428517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain