Gene : Solyc01g111470.2 S. lycopersicum ITAG2.4
Defline:  (1 of 420) PF13041 - PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7L879_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  4195 Name:  ? Solyc01g111470.2
Secondary Identifier:  ? PAC:36138688
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g111470.2 0.5kb upstream 0.5kb upstream 4200 true SL2.50ch01: 97692334-97696533 Solanum lycopersicum
Solyc01g111470.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 97696034-97696533 Solanum lycopersicum
Solyc01g111470.2 0.5kb downstream 0.5kb downstream 4200 true SL2.50ch01: 97691834-97696033 Solanum lycopersicum
Solyc01g111470.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 97691834-97692333 Solanum lycopersicum
Solyc01g111470.2 1.0kb upstream 1.0kb upstream 4700 true SL2.50ch01: 97692334-97697033 Solanum lycopersicum
Solyc01g111470.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 97696034-97697033 Solanum lycopersicum
Solyc01g111470.2 1.0kb downstream 1.0kb downstream 4700 true SL2.50ch01: 97691334-97696033 Solanum lycopersicum
Solyc01g111470.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 97691334-97692333 Solanum lycopersicum
Solyc01g111470.2 2.0kb upstream 2.0kb upstream 5700 true SL2.50ch01: 97692334-97698033 Solanum lycopersicum
Solyc01g111470.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 97696034-97698033 Solanum lycopersicum
Solyc01g111470.2 2.0kb downstream 2.0kb downstream 5700 true SL2.50ch01: 97690334-97696033 Solanum lycopersicum
Solyc01g111470.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 97690334-97692333 Solanum lycopersicum
Solyc01g111470.2 5.0kb upstream 5.0kb upstream 8700 true SL2.50ch01: 97692334-97701033 Solanum lycopersicum
Solyc01g111470.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 97696034-97701033 Solanum lycopersicum
Solyc01g111470.2 5.0kb downstream 5.0kb downstream 8700 true SL2.50ch01: 97687334-97696033 Solanum lycopersicum
Solyc01g111470.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 97687334-97692333 Solanum lycopersicum
Solyc01g111470.2 10.0kb upstream 10.0kb upstream 13700 true SL2.50ch01: 97692334-97706033 Solanum lycopersicum
Solyc01g111470.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 97696034-97706033 Solanum lycopersicum
Solyc01g111470.2 10.0kb downstream 10.0kb downstream 13700 true SL2.50ch01: 97682334-97696033 Solanum lycopersicum
Solyc01g111470.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 97682334-97692333 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469885 5263 Asterids View MSA
123738261 5271 Pentapetalae View MSA
122794449 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain