Gene : Solyc04g009350.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K00817 - histidinol-phosphate aminotransferase (hisC) Description:  Histidinol-phosphate aminotransferase (AHRD V1 **** B6TRS1_MAIZE); contains Interpro domain(s) IPR005861 Histidinol-phosphate aminotransferase
Genomic Order:  336 Name:  ? Solyc04g009350.2
Secondary Identifier:  ? PAC:36141786
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum HISTSYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g009350.2 0.5kb upstream 0.5kb upstream 7387 true SL2.50ch04: 2786259-2793645 Solanum lycopersicum
Solyc04g009350.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 2793146-2793645 Solanum lycopersicum
Solyc04g009350.2 0.5kb downstream 0.5kb downstream 7387 true SL2.50ch04: 2785759-2793145 Solanum lycopersicum
Solyc04g009350.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 2785759-2786258 Solanum lycopersicum
Solyc04g009350.2 1.0kb upstream 1.0kb upstream 7887 true SL2.50ch04: 2786259-2794145 Solanum lycopersicum
Solyc04g009350.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 2793146-2794145 Solanum lycopersicum
Solyc04g009350.2 1.0kb downstream 1.0kb downstream 7887 true SL2.50ch04: 2785259-2793145 Solanum lycopersicum
Solyc04g009350.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 2785259-2786258 Solanum lycopersicum
Solyc04g009350.2 2.0kb upstream 2.0kb upstream 8887 true SL2.50ch04: 2786259-2795145 Solanum lycopersicum
Solyc04g009350.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 2793146-2795145 Solanum lycopersicum
Solyc04g009350.2 2.0kb downstream 2.0kb downstream 8887 true SL2.50ch04: 2784259-2793145 Solanum lycopersicum
Solyc04g009350.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 2784259-2786258 Solanum lycopersicum
Solyc04g009350.2 5.0kb upstream 5.0kb upstream 11887 true SL2.50ch04: 2786259-2798145 Solanum lycopersicum
Solyc04g009350.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 2793146-2798145 Solanum lycopersicum
Solyc04g009350.2 5.0kb downstream 5.0kb downstream 11887 true SL2.50ch04: 2781259-2793145 Solanum lycopersicum
Solyc04g009350.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 2781259-2786258 Solanum lycopersicum
Solyc04g009350.2 10.0kb upstream 10.0kb upstream 16887 true SL2.50ch04: 2786259-2803145 Solanum lycopersicum
Solyc04g009350.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 2793146-2803145 Solanum lycopersicum
Solyc04g009350.2 10.0kb downstream 10.0kb downstream 16887 true SL2.50ch04: 2776259-2793145 Solanum lycopersicum
Solyc04g009350.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 2776259-2786258 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466834 5263 Asterids View MSA
123738410 5271 Pentapetalae View MSA
122789923 5272 Eudicot View MSA
122043706 5273 Angiosperm View MSA
121344225 5274 Embryophyte View MSA
123423969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain