Gene : Solyc04g009580.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 2.7.8.5 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase / Phosphatidylglycerophosphate synthase Description:  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (AHRD V1 *-** PGSA_SODGM); contains Interpro domain(s) IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Genomic Order:  359 Name:  ? Solyc04g009580.2
Secondary Identifier:  ? PAC:36143437
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY4FS-7 Solanum lycopersicum pathologic  
Slycopersicum PWY-5269 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g009580.2 0.5kb upstream 0.5kb upstream 4788 true SL2.50ch04: 2975291-2980078 Solanum lycopersicum
Solyc04g009580.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 2975291-2975790 Solanum lycopersicum
Solyc04g009580.2 0.5kb downstream 0.5kb downstream 4788 true SL2.50ch04: 2975791-2980578 Solanum lycopersicum
Solyc04g009580.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 2980079-2980578 Solanum lycopersicum
Solyc04g009580.2 1.0kb upstream 1.0kb upstream 5288 true SL2.50ch04: 2974791-2980078 Solanum lycopersicum
Solyc04g009580.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 2974791-2975790 Solanum lycopersicum
Solyc04g009580.2 1.0kb downstream 1.0kb downstream 5288 true SL2.50ch04: 2975791-2981078 Solanum lycopersicum
Solyc04g009580.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 2980079-2981078 Solanum lycopersicum
Solyc04g009580.2 2.0kb upstream 2.0kb upstream 6288 true SL2.50ch04: 2973791-2980078 Solanum lycopersicum
Solyc04g009580.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 2973791-2975790 Solanum lycopersicum
Solyc04g009580.2 2.0kb downstream 2.0kb downstream 6288 true SL2.50ch04: 2975791-2982078 Solanum lycopersicum
Solyc04g009580.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 2980079-2982078 Solanum lycopersicum
Solyc04g009580.2 5.0kb upstream 5.0kb upstream 9288 true SL2.50ch04: 2970791-2980078 Solanum lycopersicum
Solyc04g009580.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 2970791-2975790 Solanum lycopersicum
Solyc04g009580.2 5.0kb downstream 5.0kb downstream 9288 true SL2.50ch04: 2975791-2985078 Solanum lycopersicum
Solyc04g009580.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 2980079-2985078 Solanum lycopersicum
Solyc04g009580.2 10.0kb upstream 10.0kb upstream 14288 true SL2.50ch04: 2965791-2980078 Solanum lycopersicum
Solyc04g009580.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 2965791-2975790 Solanum lycopersicum
Solyc04g009580.2 10.0kb downstream 10.0kb downstream 14288 true SL2.50ch04: 2975791-2990078 Solanum lycopersicum
Solyc04g009580.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 2980079-2990078 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041214 5273 Angiosperm View MSA
121473121 5263 Asterids View MSA
123750355 5271 Pentapetalae View MSA
122791473 5272 Eudicot View MSA
121349383 5274 Embryophyte View MSA
123424626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain