Gene : Solyc04g008730.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11452:SF18 - ALPHA-GALACTOSIDASE 1 Description:  Alpha-galactosidase 1 (AHRD V1 **** Q5ZP79_PEA); contains Interpro domain(s) IPR013785 Aldolase-type TIM barrel
Genomic Order:  274 Name:  ? Solyc04g008730.2
Secondary Identifier:  ? PAC:36143936
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY0-1301 Solanum lycopersicum pathologic  
Slycopersicum PWY-6527 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g008730.2 0.5kb upstream 0.5kb upstream 4763 true SL2.50ch04: 2393747-2398509 Solanum lycopersicum
Solyc04g008730.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 2398010-2398509 Solanum lycopersicum
Solyc04g008730.2 0.5kb downstream 0.5kb downstream 4763 true SL2.50ch04: 2393247-2398009 Solanum lycopersicum
Solyc04g008730.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 2393247-2393746 Solanum lycopersicum
Solyc04g008730.2 1.0kb upstream 1.0kb upstream 5263 true SL2.50ch04: 2393747-2399009 Solanum lycopersicum
Solyc04g008730.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 2398010-2399009 Solanum lycopersicum
Solyc04g008730.2 1.0kb downstream 1.0kb downstream 5263 true SL2.50ch04: 2392747-2398009 Solanum lycopersicum
Solyc04g008730.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 2392747-2393746 Solanum lycopersicum
Solyc04g008730.2 2.0kb upstream 2.0kb upstream 6263 true SL2.50ch04: 2393747-2400009 Solanum lycopersicum
Solyc04g008730.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 2398010-2400009 Solanum lycopersicum
Solyc04g008730.2 2.0kb downstream 2.0kb downstream 6263 true SL2.50ch04: 2391747-2398009 Solanum lycopersicum
Solyc04g008730.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 2391747-2393746 Solanum lycopersicum
Solyc04g008730.2 5.0kb upstream 5.0kb upstream 9263 true SL2.50ch04: 2393747-2403009 Solanum lycopersicum
Solyc04g008730.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 2398010-2403009 Solanum lycopersicum
Solyc04g008730.2 5.0kb downstream 5.0kb downstream 9263 true SL2.50ch04: 2388747-2398009 Solanum lycopersicum
Solyc04g008730.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 2388747-2393746 Solanum lycopersicum
Solyc04g008730.2 10.0kb upstream 10.0kb upstream 14263 true SL2.50ch04: 2393747-2408009 Solanum lycopersicum
Solyc04g008730.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 2398010-2408009 Solanum lycopersicum
Solyc04g008730.2 10.0kb downstream 10.0kb downstream 14263 true SL2.50ch04: 2383747-2398009 Solanum lycopersicum
Solyc04g008730.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 2383747-2393746 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475659 5263 Asterids View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain