Gene : Solyc04g008590.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Description:  Pyruvate dehydrogenase E1 component subunit beta (AHRD V1 ***- B6TQ36_MAIZE); contains Interpro domain(s) IPR005475 Transketolase, central region
Genomic Order:  260 Name:  ? Solyc04g008590.2
Secondary Identifier:  ? PAC:36142394
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5173 Solanum lycopersicum pathologic  
Slycopersicum PWY-5464 Solanum lycopersicum pathologic  
Slycopersicum PYRUVDEHYD-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g008590.2 0.5kb upstream 0.5kb upstream 5708 true SL2.50ch04: 2195490-2201197 Solanum lycopersicum
Solyc04g008590.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 2195490-2195989 Solanum lycopersicum
Solyc04g008590.2 0.5kb downstream 0.5kb downstream 5708 true SL2.50ch04: 2195990-2201697 Solanum lycopersicum
Solyc04g008590.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 2201198-2201697 Solanum lycopersicum
Solyc04g008590.2 1.0kb upstream 1.0kb upstream 6208 true SL2.50ch04: 2194990-2201197 Solanum lycopersicum
Solyc04g008590.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 2194990-2195989 Solanum lycopersicum
Solyc04g008590.2 1.0kb downstream 1.0kb downstream 6208 true SL2.50ch04: 2195990-2202197 Solanum lycopersicum
Solyc04g008590.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 2201198-2202197 Solanum lycopersicum
Solyc04g008590.2 2.0kb upstream 2.0kb upstream 7208 true SL2.50ch04: 2193990-2201197 Solanum lycopersicum
Solyc04g008590.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 2193990-2195989 Solanum lycopersicum
Solyc04g008590.2 2.0kb downstream 2.0kb downstream 7208 true SL2.50ch04: 2195990-2203197 Solanum lycopersicum
Solyc04g008590.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 2201198-2203197 Solanum lycopersicum
Solyc04g008590.2 5.0kb upstream 5.0kb upstream 10208 true SL2.50ch04: 2190990-2201197 Solanum lycopersicum
Solyc04g008590.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 2190990-2195989 Solanum lycopersicum
Solyc04g008590.2 5.0kb downstream 5.0kb downstream 10208 true SL2.50ch04: 2195990-2206197 Solanum lycopersicum
Solyc04g008590.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 2201198-2206197 Solanum lycopersicum
Solyc04g008590.2 10.0kb upstream 10.0kb upstream 15208 true SL2.50ch04: 2185990-2201197 Solanum lycopersicum
Solyc04g008590.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 2185990-2195989 Solanum lycopersicum
Solyc04g008590.2 10.0kb downstream 10.0kb downstream 15208 true SL2.50ch04: 2195990-2211197 Solanum lycopersicum
Solyc04g008590.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 2201198-2211197 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475801 5263 Asterids View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain