Gene : Solyc04g009950.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K12860 - pre-mRNA-splicing factor CDC5/CEF1 (CDC5L, CDC5, CEF1) Description:  Pre-mRNA splicing factor (AHRD V1 **-- C5K279_AJEDS); contains Interpro domain(s) IPR015495 Myb transcription factor
Genomic Order:  396 Name:  ? Solyc04g009950.2
Secondary Identifier:  ? PAC:36142812
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g009950.2 0.5kb upstream 0.5kb upstream 5928 true SL2.50ch04: 3260769-3266696 Solanum lycopersicum
Solyc04g009950.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 3260769-3261268 Solanum lycopersicum
Solyc04g009950.2 0.5kb downstream 0.5kb downstream 5928 true SL2.50ch04: 3261269-3267196 Solanum lycopersicum
Solyc04g009950.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 3266697-3267196 Solanum lycopersicum
Solyc04g009950.2 1.0kb upstream 1.0kb upstream 6428 true SL2.50ch04: 3260269-3266696 Solanum lycopersicum
Solyc04g009950.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 3260269-3261268 Solanum lycopersicum
Solyc04g009950.2 1.0kb downstream 1.0kb downstream 6428 true SL2.50ch04: 3261269-3267696 Solanum lycopersicum
Solyc04g009950.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 3266697-3267696 Solanum lycopersicum
Solyc04g009950.2 2.0kb upstream 2.0kb upstream 7428 true SL2.50ch04: 3259269-3266696 Solanum lycopersicum
Solyc04g009950.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 3259269-3261268 Solanum lycopersicum
Solyc04g009950.2 2.0kb downstream 2.0kb downstream 7428 true SL2.50ch04: 3261269-3268696 Solanum lycopersicum
Solyc04g009950.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 3266697-3268696 Solanum lycopersicum
Solyc04g009950.2 5.0kb upstream 5.0kb upstream 10428 true SL2.50ch04: 3256269-3266696 Solanum lycopersicum
Solyc04g009950.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 3256269-3261268 Solanum lycopersicum
Solyc04g009950.2 5.0kb downstream 5.0kb downstream 10428 true SL2.50ch04: 3261269-3271696 Solanum lycopersicum
Solyc04g009950.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 3266697-3271696 Solanum lycopersicum
Solyc04g009950.2 10.0kb upstream 10.0kb upstream 15428 true SL2.50ch04: 3251269-3266696 Solanum lycopersicum
Solyc04g009950.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 3251269-3261268 Solanum lycopersicum
Solyc04g009950.2 10.0kb downstream 10.0kb downstream 15428 true SL2.50ch04: 3261269-3276696 Solanum lycopersicum
Solyc04g009950.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 3266697-3276696 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466922 5263 Asterids View MSA
123736747 5271 Pentapetalae View MSA
122790894 5272 Eudicot View MSA
122043628 5273 Angiosperm View MSA
121344956 5274 Embryophyte View MSA
123426908 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain