Gene : Solyc04g010260.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 Description:  Pre-mRNA-splicing factor RSE1 (AHRD V1 ***- A8N7S1_COPC7); contains Interpro domain(s) IPR004871 Cleavage and polyadenylation specificity factor, A subunit, C-terminal
Genomic Order:  426 Name:  ? Solyc04g010260.2
Secondary Identifier:  ? PAC:36143556
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g010260.2 0.5kb upstream 0.5kb upstream 5552 true SL2.50ch04: 3583577-3589128 Solanum lycopersicum
Solyc04g010260.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 3588629-3589128 Solanum lycopersicum
Solyc04g010260.2 0.5kb downstream 0.5kb downstream 5552 true SL2.50ch04: 3583077-3588628 Solanum lycopersicum
Solyc04g010260.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 3583077-3583576 Solanum lycopersicum
Solyc04g010260.2 1.0kb upstream 1.0kb upstream 6052 true SL2.50ch04: 3583577-3589628 Solanum lycopersicum
Solyc04g010260.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 3588629-3589628 Solanum lycopersicum
Solyc04g010260.2 1.0kb downstream 1.0kb downstream 6052 true SL2.50ch04: 3582577-3588628 Solanum lycopersicum
Solyc04g010260.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 3582577-3583576 Solanum lycopersicum
Solyc04g010260.2 2.0kb upstream 2.0kb upstream 7052 true SL2.50ch04: 3583577-3590628 Solanum lycopersicum
Solyc04g010260.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 3588629-3590628 Solanum lycopersicum
Solyc04g010260.2 2.0kb downstream 2.0kb downstream 7052 true SL2.50ch04: 3581577-3588628 Solanum lycopersicum
Solyc04g010260.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 3581577-3583576 Solanum lycopersicum
Solyc04g010260.2 5.0kb upstream 5.0kb upstream 10052 true SL2.50ch04: 3583577-3593628 Solanum lycopersicum
Solyc04g010260.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 3588629-3593628 Solanum lycopersicum
Solyc04g010260.2 5.0kb downstream 5.0kb downstream 10052 true SL2.50ch04: 3578577-3588628 Solanum lycopersicum
Solyc04g010260.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 3578577-3583576 Solanum lycopersicum
Solyc04g010260.2 10.0kb upstream 10.0kb upstream 15052 true SL2.50ch04: 3583577-3598628 Solanum lycopersicum
Solyc04g010260.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 3588629-3598628 Solanum lycopersicum
Solyc04g010260.2 10.0kb downstream 10.0kb downstream 15052 true SL2.50ch04: 3573577-3588628 Solanum lycopersicum
Solyc04g010260.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 3573577-3583576 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466411 5263 Asterids View MSA
123746995 5271 Pentapetalae View MSA
122794843 5272 Eudicot View MSA
122048690 5273 Angiosperm View MSA
121348178 5274 Embryophyte View MSA
123426142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain