Gene : Solyc10g086150.1 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K11294 - nucleolin (NCL, NSR1) Description:  Single-stranded DNA binding protein (AHRD V1 **-* Q8W214_SOLTU); contains Interpro domain(s) IPR000504 RNA recognition motif, RNP-1
Genomic Order:  2481 Name:  ? Solyc10g086150.1
Secondary Identifier:  ? PAC:36155659
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g086150.1 0.5kb upstream 0.5kb upstream 2124 true SL2.50ch10: 65078648-65080771 Solanum lycopersicum
Solyc10g086150.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 65080272-65080771 Solanum lycopersicum
Solyc10g086150.1 0.5kb downstream 0.5kb downstream 2124 true SL2.50ch10: 65078148-65080271 Solanum lycopersicum
Solyc10g086150.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 65078148-65078647 Solanum lycopersicum
Solyc10g086150.1 1.0kb upstream 1.0kb upstream 2624 true SL2.50ch10: 65078648-65081271 Solanum lycopersicum
Solyc10g086150.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 65080272-65081271 Solanum lycopersicum
Solyc10g086150.1 1.0kb downstream 1.0kb downstream 2624 true SL2.50ch10: 65077648-65080271 Solanum lycopersicum
Solyc10g086150.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 65077648-65078647 Solanum lycopersicum
Solyc10g086150.1 2.0kb upstream 2.0kb upstream 3624 true SL2.50ch10: 65078648-65082271 Solanum lycopersicum
Solyc10g086150.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 65080272-65082271 Solanum lycopersicum
Solyc10g086150.1 2.0kb downstream 2.0kb downstream 3624 true SL2.50ch10: 65076648-65080271 Solanum lycopersicum
Solyc10g086150.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 65076648-65078647 Solanum lycopersicum
Solyc10g086150.1 5.0kb upstream 5.0kb upstream 6624 true SL2.50ch10: 65078648-65085271 Solanum lycopersicum
Solyc10g086150.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 65080272-65085271 Solanum lycopersicum
Solyc10g086150.1 5.0kb downstream 5.0kb downstream 6624 true SL2.50ch10: 65073648-65080271 Solanum lycopersicum
Solyc10g086150.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 65073648-65078647 Solanum lycopersicum
Solyc10g086150.1 10.0kb upstream 10.0kb upstream 11624 true SL2.50ch10: 65078648-65090271 Solanum lycopersicum
Solyc10g086150.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 65080272-65090271 Solanum lycopersicum
Solyc10g086150.1 10.0kb downstream 10.0kb downstream 11624 true SL2.50ch10: 65068648-65080271 Solanum lycopersicum
Solyc10g086150.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 65068648-65078647 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040882 5273 Angiosperm View MSA
121479138 5263 Asterids View MSA
123752208 5271 Pentapetalae View MSA
122797685 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain