Gene : Solyc10g086120.1 S. lycopersicum ITAG2.4
Defline:  (1 of 45) PF04535 - Domain of unknown function (DUF588) (DUF588) Description:  UPF0497 membrane protein At2g28370 (AHRD V1 ***- U4977_ARATH); contains Interpro domain(s) IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant
Genomic Order:  2479 Name:  ? Solyc10g086120.1
Secondary Identifier:  ? PAC:36154490
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g086120.1 0.5kb upstream 0.5kb upstream 5718 true SL2.50ch10: 65058935-65064652 Solanum lycopersicum
Solyc10g086120.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 65064153-65064652 Solanum lycopersicum
Solyc10g086120.1 0.5kb downstream 0.5kb downstream 5718 true SL2.50ch10: 65058435-65064152 Solanum lycopersicum
Solyc10g086120.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 65058435-65058934 Solanum lycopersicum
Solyc10g086120.1 1.0kb upstream 1.0kb upstream 6218 true SL2.50ch10: 65058935-65065152 Solanum lycopersicum
Solyc10g086120.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 65064153-65065152 Solanum lycopersicum
Solyc10g086120.1 1.0kb downstream 1.0kb downstream 6218 true SL2.50ch10: 65057935-65064152 Solanum lycopersicum
Solyc10g086120.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 65057935-65058934 Solanum lycopersicum
Solyc10g086120.1 2.0kb upstream 2.0kb upstream 7218 true SL2.50ch10: 65058935-65066152 Solanum lycopersicum
Solyc10g086120.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 65064153-65066152 Solanum lycopersicum
Solyc10g086120.1 2.0kb downstream 2.0kb downstream 7218 true SL2.50ch10: 65056935-65064152 Solanum lycopersicum
Solyc10g086120.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 65056935-65058934 Solanum lycopersicum
Solyc10g086120.1 5.0kb upstream 5.0kb upstream 10218 true SL2.50ch10: 65058935-65069152 Solanum lycopersicum
Solyc10g086120.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 65064153-65069152 Solanum lycopersicum
Solyc10g086120.1 5.0kb downstream 5.0kb downstream 10218 true SL2.50ch10: 65053935-65064152 Solanum lycopersicum
Solyc10g086120.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 65053935-65058934 Solanum lycopersicum
Solyc10g086120.1 10.0kb upstream 10.0kb upstream 15218 true SL2.50ch10: 65058935-65074152 Solanum lycopersicum
Solyc10g086120.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 65064153-65074152 Solanum lycopersicum
Solyc10g086120.1 10.0kb downstream 10.0kb downstream 15218 true SL2.50ch10: 65048935-65064152 Solanum lycopersicum
Solyc10g086120.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 65048935-65058934 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027815 5273 Angiosperm View MSA
121471108 5263 Asterids View MSA
123747778 5271 Pentapetalae View MSA
122796874 5272 Eudicot View MSA
121349907 5274 Embryophyte View MSA
123381495 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain