Gene : Solyc04g005280.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Description:  BHLH transcription factor (AHRD V1 *-** Q401N4_9LILI); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Genomic Order:  29 Name:  ? Solyc04g005280.2
Secondary Identifier:  ? PAC:36143755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g005280.2 0.5kb upstream 0.5kb upstream 7317 true SL2.50ch04: 204832-212148 Solanum lycopersicum
Solyc04g005280.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 204832-205331 Solanum lycopersicum
Solyc04g005280.2 0.5kb downstream 0.5kb downstream 7317 true SL2.50ch04: 205332-212648 Solanum lycopersicum
Solyc04g005280.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 212149-212648 Solanum lycopersicum
Solyc04g005280.2 1.0kb upstream 1.0kb upstream 7817 true SL2.50ch04: 204332-212148 Solanum lycopersicum
Solyc04g005280.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 204332-205331 Solanum lycopersicum
Solyc04g005280.2 1.0kb downstream 1.0kb downstream 7817 true SL2.50ch04: 205332-213148 Solanum lycopersicum
Solyc04g005280.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 212149-213148 Solanum lycopersicum
Solyc04g005280.2 2.0kb upstream 2.0kb upstream 8817 true SL2.50ch04: 203332-212148 Solanum lycopersicum
Solyc04g005280.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 203332-205331 Solanum lycopersicum
Solyc04g005280.2 2.0kb downstream 2.0kb downstream 8817 true SL2.50ch04: 205332-214148 Solanum lycopersicum
Solyc04g005280.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 212149-214148 Solanum lycopersicum
Solyc04g005280.2 5.0kb upstream 5.0kb upstream 11817 true SL2.50ch04: 200332-212148 Solanum lycopersicum
Solyc04g005280.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 200332-205331 Solanum lycopersicum
Solyc04g005280.2 5.0kb downstream 5.0kb downstream 11817 true SL2.50ch04: 205332-217148 Solanum lycopersicum
Solyc04g005280.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 212149-217148 Solanum lycopersicum
Solyc04g005280.2 10.0kb upstream 10.0kb upstream 16817 true SL2.50ch04: 195332-212148 Solanum lycopersicum
Solyc04g005280.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 195332-205331 Solanum lycopersicum
Solyc04g005280.2 10.0kb downstream 10.0kb downstream 16817 true SL2.50ch04: 205332-222148 Solanum lycopersicum
Solyc04g005280.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 212149-222148 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121385985 5263 Asterids View MSA
123737331 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain