Gene : Solyc04g005190.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14759 - isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase (PHYLLO) Description:  2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (AHRD V1 *-*- D5A2Q7_SPIPL); contains Interpro domain(s) IPR004433 Menaquinone biosynthesis protein
Genomic Order:  20 Name:  ? Solyc04g005190.2
Secondary Identifier:  ? PAC:36141980
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5837 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g005190.2 0.5kb upstream 0.5kb upstream 15747 true SL2.50ch04: 129895-145641 Solanum lycopersicum
Solyc04g005190.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 129895-130394 Solanum lycopersicum
Solyc04g005190.2 0.5kb downstream 0.5kb downstream 15747 true SL2.50ch04: 130395-146141 Solanum lycopersicum
Solyc04g005190.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 145642-146141 Solanum lycopersicum
Solyc04g005190.2 1.0kb upstream 1.0kb upstream 16247 true SL2.50ch04: 129395-145641 Solanum lycopersicum
Solyc04g005190.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 129395-130394 Solanum lycopersicum
Solyc04g005190.2 1.0kb downstream 1.0kb downstream 16247 true SL2.50ch04: 130395-146641 Solanum lycopersicum
Solyc04g005190.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 145642-146641 Solanum lycopersicum
Solyc04g005190.2 2.0kb upstream 2.0kb upstream 17247 true SL2.50ch04: 128395-145641 Solanum lycopersicum
Solyc04g005190.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 128395-130394 Solanum lycopersicum
Solyc04g005190.2 2.0kb downstream 2.0kb downstream 17247 true SL2.50ch04: 130395-147641 Solanum lycopersicum
Solyc04g005190.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 145642-147641 Solanum lycopersicum
Solyc04g005190.2 5.0kb upstream 5.0kb upstream 20247 true SL2.50ch04: 125395-145641 Solanum lycopersicum
Solyc04g005190.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 125395-130394 Solanum lycopersicum
Solyc04g005190.2 5.0kb downstream 5.0kb downstream 20247 true SL2.50ch04: 130395-150641 Solanum lycopersicum
Solyc04g005190.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 145642-150641 Solanum lycopersicum
Solyc04g005190.2 10.0kb upstream 10.0kb upstream 25247 true SL2.50ch04: 120395-145641 Solanum lycopersicum
Solyc04g005190.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 120395-130394 Solanum lycopersicum
Solyc04g005190.2 10.0kb downstream 10.0kb downstream 25247 true SL2.50ch04: 130395-155641 Solanum lycopersicum
Solyc04g005190.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 145642-155641 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121366886 5263 Asterids Singleton cluster - no MSA
123744882 5271 Pentapetalae View MSA
122788106 5272 Eudicot View MSA
122043367 5273 Angiosperm View MSA
121345465 5274 Embryophyte View MSA
123425711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain