Gene : Solyc10g085200.1 S. lycopersicum ITAG2.4
Defline:  (1 of 4) 1.3.3.6 - Acyl-CoA oxidase Description:  Acyl-CoA dehydrogenase (AHRD V1 ***- A3XH21_LEEBM); contains Interpro domain(s) IPR009100 Acyl-CoA dehydrogenase/oxidase, middle and N-terminal
Genomic Order:  2387 Name:  ? Solyc10g085200.1
Secondary Identifier:  ? PAC:36154950
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5136 Solanum lycopersicum pathologic  
Slycopersicum PWY-561 Solanum lycopersicum pathologic  
Slycopersicum PWY-6837 Solanum lycopersicum pathologic  
Slycopersicum PWY-735 Solanum lycopersicum pathologic  
Slycopersicum PWY-7606 Solanum lycopersicum pathologic  
Slycopersicum PWY-7726 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g085200.1 0.5kb upstream 0.5kb upstream 3800 true SL2.50ch10: 64470811-64474610 Solanum lycopersicum
Solyc10g085200.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 64470811-64471310 Solanum lycopersicum
Solyc10g085200.1 0.5kb downstream 0.5kb downstream 3800 true SL2.50ch10: 64471311-64475110 Solanum lycopersicum
Solyc10g085200.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 64474611-64475110 Solanum lycopersicum
Solyc10g085200.1 1.0kb upstream 1.0kb upstream 4300 true SL2.50ch10: 64470311-64474610 Solanum lycopersicum
Solyc10g085200.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 64470311-64471310 Solanum lycopersicum
Solyc10g085200.1 1.0kb downstream 1.0kb downstream 4300 true SL2.50ch10: 64471311-64475610 Solanum lycopersicum
Solyc10g085200.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 64474611-64475610 Solanum lycopersicum
Solyc10g085200.1 2.0kb upstream 2.0kb upstream 5300 true SL2.50ch10: 64469311-64474610 Solanum lycopersicum
Solyc10g085200.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 64469311-64471310 Solanum lycopersicum
Solyc10g085200.1 2.0kb downstream 2.0kb downstream 5300 true SL2.50ch10: 64471311-64476610 Solanum lycopersicum
Solyc10g085200.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 64474611-64476610 Solanum lycopersicum
Solyc10g085200.1 5.0kb upstream 5.0kb upstream 8300 true SL2.50ch10: 64466311-64474610 Solanum lycopersicum
Solyc10g085200.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 64466311-64471310 Solanum lycopersicum
Solyc10g085200.1 5.0kb downstream 5.0kb downstream 8300 true SL2.50ch10: 64471311-64479610 Solanum lycopersicum
Solyc10g085200.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 64474611-64479610 Solanum lycopersicum
Solyc10g085200.1 10.0kb upstream 10.0kb upstream 13300 true SL2.50ch10: 64461311-64474610 Solanum lycopersicum
Solyc10g085200.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 64461311-64471310 Solanum lycopersicum
Solyc10g085200.1 10.0kb downstream 10.0kb downstream 13300 true SL2.50ch10: 64471311-64484610 Solanum lycopersicum
Solyc10g085200.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 64474611-64484610 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479711 5263 Asterids View MSA
123739939 5271 Pentapetalae View MSA
122789024 5272 Eudicot View MSA
122043325 5273 Angiosperm View MSA
121347950 5274 Embryophyte View MSA
123424845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain