Gene : Solyc04g007280.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23198:SF4 - NUCLEOPORIN AUTOPEPTIDASE Description:  Nup98 protein (Fragment) (AHRD V1 *--- Q68G59_MOUSE); contains Interpro domain(s) IPR007230 Peptidase S59, nucleoporin
Genomic Order:  130 Name:  ? Solyc04g007280.2
Secondary Identifier:  ? PAC:36141429
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g007280.2 0.5kb upstream 0.5kb upstream 12222 true SL2.50ch04: 990413-1002634 Solanum lycopersicum
Solyc04g007280.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 990413-990912 Solanum lycopersicum
Solyc04g007280.2 0.5kb downstream 0.5kb downstream 12222 true SL2.50ch04: 990913-1003134 Solanum lycopersicum
Solyc04g007280.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 1002635-1003134 Solanum lycopersicum
Solyc04g007280.2 1.0kb upstream 1.0kb upstream 12722 true SL2.50ch04: 989913-1002634 Solanum lycopersicum
Solyc04g007280.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 989913-990912 Solanum lycopersicum
Solyc04g007280.2 1.0kb downstream 1.0kb downstream 12722 true SL2.50ch04: 990913-1003634 Solanum lycopersicum
Solyc04g007280.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 1002635-1003634 Solanum lycopersicum
Solyc04g007280.2 2.0kb upstream 2.0kb upstream 13722 true SL2.50ch04: 988913-1002634 Solanum lycopersicum
Solyc04g007280.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 988913-990912 Solanum lycopersicum
Solyc04g007280.2 2.0kb downstream 2.0kb downstream 13722 true SL2.50ch04: 990913-1004634 Solanum lycopersicum
Solyc04g007280.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 1002635-1004634 Solanum lycopersicum
Solyc04g007280.2 5.0kb upstream 5.0kb upstream 16722 true SL2.50ch04: 985913-1002634 Solanum lycopersicum
Solyc04g007280.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 985913-990912 Solanum lycopersicum
Solyc04g007280.2 5.0kb downstream 5.0kb downstream 16722 true SL2.50ch04: 990913-1007634 Solanum lycopersicum
Solyc04g007280.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 1002635-1007634 Solanum lycopersicum
Solyc04g007280.2 10.0kb upstream 10.0kb upstream 21722 true SL2.50ch04: 980913-1002634 Solanum lycopersicum
Solyc04g007280.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 980913-990912 Solanum lycopersicum
Solyc04g007280.2 10.0kb downstream 10.0kb downstream 21722 true SL2.50ch04: 990913-1012634 Solanum lycopersicum
Solyc04g007280.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 1002635-1012634 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472918 5263 Asterids View MSA
123748776 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain