Gene : Solyc04g005690.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K12825 - splicing factor 3A subunit 1 (SF3A1, SAP114) Description:  Splicing factor (AHRD V1 *-*- Q5CJR5_CRYHO); contains Interpro domain(s) IPR000061 SWAP/Surp
Genomic Order:  70 Name:  ? Solyc04g005690.2
Secondary Identifier:  ? PAC:36143370
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g005690.2 0.5kb upstream 0.5kb upstream 5683 true SL2.50ch04: 451234-456916 Solanum lycopersicum
Solyc04g005690.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 451234-451733 Solanum lycopersicum
Solyc04g005690.2 0.5kb downstream 0.5kb downstream 5683 true SL2.50ch04: 451734-457416 Solanum lycopersicum
Solyc04g005690.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 456917-457416 Solanum lycopersicum
Solyc04g005690.2 1.0kb upstream 1.0kb upstream 6183 true SL2.50ch04: 450734-456916 Solanum lycopersicum
Solyc04g005690.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 450734-451733 Solanum lycopersicum
Solyc04g005690.2 1.0kb downstream 1.0kb downstream 6183 true SL2.50ch04: 451734-457916 Solanum lycopersicum
Solyc04g005690.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 456917-457916 Solanum lycopersicum
Solyc04g005690.2 2.0kb upstream 2.0kb upstream 7183 true SL2.50ch04: 449734-456916 Solanum lycopersicum
Solyc04g005690.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 449734-451733 Solanum lycopersicum
Solyc04g005690.2 2.0kb downstream 2.0kb downstream 7183 true SL2.50ch04: 451734-458916 Solanum lycopersicum
Solyc04g005690.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 456917-458916 Solanum lycopersicum
Solyc04g005690.2 5.0kb upstream 5.0kb upstream 10183 true SL2.50ch04: 446734-456916 Solanum lycopersicum
Solyc04g005690.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 446734-451733 Solanum lycopersicum
Solyc04g005690.2 5.0kb downstream 5.0kb downstream 10183 true SL2.50ch04: 451734-461916 Solanum lycopersicum
Solyc04g005690.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 456917-461916 Solanum lycopersicum
Solyc04g005690.2 10.0kb upstream 10.0kb upstream 15183 true SL2.50ch04: 441734-456916 Solanum lycopersicum
Solyc04g005690.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 441734-451733 Solanum lycopersicum
Solyc04g005690.2 10.0kb downstream 10.0kb downstream 15183 true SL2.50ch04: 451734-466916 Solanum lycopersicum
Solyc04g005690.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 456917-466916 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041332 5273 Angiosperm View MSA
121474432 5263 Asterids View MSA
123748218 5271 Pentapetalae View MSA
122792189 5272 Eudicot View MSA
121344762 5274 Embryophyte View MSA
123425409 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain