Gene : Solyc04g005680.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K02997 - small subunit ribosomal protein S9e (RP-S9e, RPS9) Description:  Ribosomal protein (AHRD V1 ***- B3TM27_ELAGV); contains Interpro domain(s) IPR002942 RNA-binding S4 IPR018079 Ribosomal protein S4, conserved site IPR001912 Ribosomal protein S4
Genomic Order:  69 Name:  ? Solyc04g005680.2
Secondary Identifier:  ? PAC:36143574
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g005680.2 0.5kb upstream 0.5kb upstream 3515 true SL2.50ch04: 447068-450582 Solanum lycopersicum
Solyc04g005680.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 450083-450582 Solanum lycopersicum
Solyc04g005680.2 0.5kb downstream 0.5kb downstream 3515 true SL2.50ch04: 446568-450082 Solanum lycopersicum
Solyc04g005680.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 446568-447067 Solanum lycopersicum
Solyc04g005680.2 1.0kb upstream 1.0kb upstream 4015 true SL2.50ch04: 447068-451082 Solanum lycopersicum
Solyc04g005680.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 450083-451082 Solanum lycopersicum
Solyc04g005680.2 1.0kb downstream 1.0kb downstream 4015 true SL2.50ch04: 446068-450082 Solanum lycopersicum
Solyc04g005680.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 446068-447067 Solanum lycopersicum
Solyc04g005680.2 2.0kb upstream 2.0kb upstream 5015 true SL2.50ch04: 447068-452082 Solanum lycopersicum
Solyc04g005680.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 450083-452082 Solanum lycopersicum
Solyc04g005680.2 2.0kb downstream 2.0kb downstream 5015 true SL2.50ch04: 445068-450082 Solanum lycopersicum
Solyc04g005680.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 445068-447067 Solanum lycopersicum
Solyc04g005680.2 5.0kb upstream 5.0kb upstream 8015 true SL2.50ch04: 447068-455082 Solanum lycopersicum
Solyc04g005680.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 450083-455082 Solanum lycopersicum
Solyc04g005680.2 5.0kb downstream 5.0kb downstream 8015 true SL2.50ch04: 442068-450082 Solanum lycopersicum
Solyc04g005680.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 442068-447067 Solanum lycopersicum
Solyc04g005680.2 10.0kb upstream 10.0kb upstream 13015 true SL2.50ch04: 447068-460082 Solanum lycopersicum
Solyc04g005680.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 450083-460082 Solanum lycopersicum
Solyc04g005680.2 10.0kb downstream 10.0kb downstream 13015 true SL2.50ch04: 437068-450082 Solanum lycopersicum
Solyc04g005680.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 437068-447067 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121367228 5263 Asterids Singleton cluster - no MSA
123748066 5271 Pentapetalae View MSA
122790013 5272 Eudicot View MSA
122042868 5273 Angiosperm View MSA
121345250 5274 Embryophyte View MSA
123426931 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain