Gene : Solyc04g007240.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11088:SF27 - ADENYLATE ISOPENTENYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Description:  tRNA dimethylallyltransferase (AHRD V1 **** D6W2X4_YEAST); contains Interpro domain(s) IPR002627 tRNA isopentenyltransferase
Genomic Order:  126 Name:  ? Solyc04g007240.1
Secondary Identifier:  ? PAC:36143668
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-2681 Solanum lycopersicum pathologic  
Slycopersicum PWY-2781 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g007240.1 0.5kb upstream 0.5kb upstream 1478 true SL2.50ch04: 942079-943556 Solanum lycopersicum
Solyc04g007240.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 942079-942578 Solanum lycopersicum
Solyc04g007240.1 0.5kb downstream 0.5kb downstream 1478 true SL2.50ch04: 942579-944056 Solanum lycopersicum
Solyc04g007240.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 943557-944056 Solanum lycopersicum
Solyc04g007240.1 1.0kb upstream 1.0kb upstream 1978 true SL2.50ch04: 941579-943556 Solanum lycopersicum
Solyc04g007240.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 941579-942578 Solanum lycopersicum
Solyc04g007240.1 1.0kb downstream 1.0kb downstream 1978 true SL2.50ch04: 942579-944556 Solanum lycopersicum
Solyc04g007240.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 943557-944556 Solanum lycopersicum
Solyc04g007240.1 2.0kb upstream 2.0kb upstream 2978 true SL2.50ch04: 940579-943556 Solanum lycopersicum
Solyc04g007240.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 940579-942578 Solanum lycopersicum
Solyc04g007240.1 2.0kb downstream 2.0kb downstream 2978 true SL2.50ch04: 942579-945556 Solanum lycopersicum
Solyc04g007240.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 943557-945556 Solanum lycopersicum
Solyc04g007240.1 5.0kb upstream 5.0kb upstream 5978 true SL2.50ch04: 937579-943556 Solanum lycopersicum
Solyc04g007240.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 937579-942578 Solanum lycopersicum
Solyc04g007240.1 5.0kb downstream 5.0kb downstream 5978 true SL2.50ch04: 942579-948556 Solanum lycopersicum
Solyc04g007240.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 943557-948556 Solanum lycopersicum
Solyc04g007240.1 10.0kb upstream 10.0kb upstream 10978 true SL2.50ch04: 932579-943556 Solanum lycopersicum
Solyc04g007240.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 932579-942578 Solanum lycopersicum
Solyc04g007240.1 10.0kb downstream 10.0kb downstream 10978 true SL2.50ch04: 942579-953556 Solanum lycopersicum
Solyc04g007240.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 943557-953556 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470077 5263 Asterids View MSA
123742682 5271 Pentapetalae View MSA
122792550 5272 Eudicot View MSA
122046326 5273 Angiosperm View MSA
121310589 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain