Gene : Solyc10g081050.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Description:  Phage-related exonuclease (AHRD V1 *-*- C6ADF2_BARGA); contains Interpro domain(s) IPR017482 Putative phage-type endonuclease
Genomic Order:  2072 Name:  ? Solyc10g081050.1
Secondary Identifier:  ? PAC:36154060
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g081050.1 0.5kb upstream 0.5kb upstream 1430 true SL2.50ch10: 62230431-62231860 Solanum lycopersicum
Solyc10g081050.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 62231361-62231860 Solanum lycopersicum
Solyc10g081050.1 0.5kb downstream 0.5kb downstream 1430 true SL2.50ch10: 62229931-62231360 Solanum lycopersicum
Solyc10g081050.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 62229931-62230430 Solanum lycopersicum
Solyc10g081050.1 1.0kb upstream 1.0kb upstream 1930 true SL2.50ch10: 62230431-62232360 Solanum lycopersicum
Solyc10g081050.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 62231361-62232360 Solanum lycopersicum
Solyc10g081050.1 1.0kb downstream 1.0kb downstream 1930 true SL2.50ch10: 62229431-62231360 Solanum lycopersicum
Solyc10g081050.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 62229431-62230430 Solanum lycopersicum
Solyc10g081050.1 2.0kb upstream 2.0kb upstream 2930 true SL2.50ch10: 62230431-62233360 Solanum lycopersicum
Solyc10g081050.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 62231361-62233360 Solanum lycopersicum
Solyc10g081050.1 2.0kb downstream 2.0kb downstream 2930 true SL2.50ch10: 62228431-62231360 Solanum lycopersicum
Solyc10g081050.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 62228431-62230430 Solanum lycopersicum
Solyc10g081050.1 5.0kb upstream 5.0kb upstream 5930 true SL2.50ch10: 62230431-62236360 Solanum lycopersicum
Solyc10g081050.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 62231361-62236360 Solanum lycopersicum
Solyc10g081050.1 5.0kb downstream 5.0kb downstream 5930 true SL2.50ch10: 62225431-62231360 Solanum lycopersicum
Solyc10g081050.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 62225431-62230430 Solanum lycopersicum
Solyc10g081050.1 10.0kb upstream 10.0kb upstream 10930 true SL2.50ch10: 62230431-62241360 Solanum lycopersicum
Solyc10g081050.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 62231361-62241360 Solanum lycopersicum
Solyc10g081050.1 10.0kb downstream 10.0kb downstream 10930 true SL2.50ch10: 62220431-62231360 Solanum lycopersicum
Solyc10g081050.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 62220431-62230430 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469726 5263 Asterids View MSA
123738180 5271 Pentapetalae View MSA
122790598 5272 Eudicot View MSA
122045989 5273 Angiosperm View MSA
123429076 5275 Viridiplantae View MSA
121346090 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain