Gene : Solyc10g080930.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR15141:SF40 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED Description:  Transcription elongation factor A protein 2 (AHRD V1 *--- TCEA2_HUMAN); contains Interpro domain(s) IPR010990 Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal
Genomic Order:  2060 Name:  ? Solyc10g080930.1
Secondary Identifier:  ? PAC:36154425
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g080930.1 0.5kb upstream 0.5kb upstream 4712 true SL2.50ch10: 62111168-62115879 Solanum lycopersicum
Solyc10g080930.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 62115380-62115879 Solanum lycopersicum
Solyc10g080930.1 0.5kb downstream 0.5kb downstream 4712 true SL2.50ch10: 62110668-62115379 Solanum lycopersicum
Solyc10g080930.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 62110668-62111167 Solanum lycopersicum
Solyc10g080930.1 1.0kb upstream 1.0kb upstream 5212 true SL2.50ch10: 62111168-62116379 Solanum lycopersicum
Solyc10g080930.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 62115380-62116379 Solanum lycopersicum
Solyc10g080930.1 1.0kb downstream 1.0kb downstream 5212 true SL2.50ch10: 62110168-62115379 Solanum lycopersicum
Solyc10g080930.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 62110168-62111167 Solanum lycopersicum
Solyc10g080930.1 2.0kb upstream 2.0kb upstream 6212 true SL2.50ch10: 62111168-62117379 Solanum lycopersicum
Solyc10g080930.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 62115380-62117379 Solanum lycopersicum
Solyc10g080930.1 2.0kb downstream 2.0kb downstream 6212 true SL2.50ch10: 62109168-62115379 Solanum lycopersicum
Solyc10g080930.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 62109168-62111167 Solanum lycopersicum
Solyc10g080930.1 5.0kb upstream 5.0kb upstream 9212 true SL2.50ch10: 62111168-62120379 Solanum lycopersicum
Solyc10g080930.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 62115380-62120379 Solanum lycopersicum
Solyc10g080930.1 5.0kb downstream 5.0kb downstream 9212 true SL2.50ch10: 62106168-62115379 Solanum lycopersicum
Solyc10g080930.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 62106168-62111167 Solanum lycopersicum
Solyc10g080930.1 10.0kb upstream 10.0kb upstream 14212 true SL2.50ch10: 62111168-62125379 Solanum lycopersicum
Solyc10g080930.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 62115380-62125379 Solanum lycopersicum
Solyc10g080930.1 10.0kb downstream 10.0kb downstream 14212 true SL2.50ch10: 62101168-62115379 Solanum lycopersicum
Solyc10g080930.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 62101168-62111167 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467938 5263 Asterids View MSA
123747167 5271 Pentapetalae View MSA
122796041 5272 Eudicot View MSA
122045393 5273 Angiosperm View MSA
121348214 5274 Embryophyte View MSA
123380774 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain