Gene : Solyc10g080810.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12917//PTHR12917:SF20 - ASPARTYL PROTEASE DDI-RELATED // SUBFAMILY NOT NAMED Description:  Ubiquitin-associated /TS-N domain-containing protein (AHRD V1 ***- D7LVJ2_ARALY); contains Interpro domain(s) IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
Genomic Order:  2050 Name:  ? Solyc10g080810.1
Secondary Identifier:  ? PAC:36154896
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g080810.1 0.5kb upstream 0.5kb upstream 5626 true SL2.50ch10: 62001986-62007611 Solanum lycopersicum
Solyc10g080810.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 62001986-62002485 Solanum lycopersicum
Solyc10g080810.1 0.5kb downstream 0.5kb downstream 5626 true SL2.50ch10: 62002486-62008111 Solanum lycopersicum
Solyc10g080810.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 62007612-62008111 Solanum lycopersicum
Solyc10g080810.1 1.0kb upstream 1.0kb upstream 6126 true SL2.50ch10: 62001486-62007611 Solanum lycopersicum
Solyc10g080810.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 62001486-62002485 Solanum lycopersicum
Solyc10g080810.1 1.0kb downstream 1.0kb downstream 6126 true SL2.50ch10: 62002486-62008611 Solanum lycopersicum
Solyc10g080810.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 62007612-62008611 Solanum lycopersicum
Solyc10g080810.1 2.0kb upstream 2.0kb upstream 7126 true SL2.50ch10: 62000486-62007611 Solanum lycopersicum
Solyc10g080810.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 62000486-62002485 Solanum lycopersicum
Solyc10g080810.1 2.0kb downstream 2.0kb downstream 7126 true SL2.50ch10: 62002486-62009611 Solanum lycopersicum
Solyc10g080810.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 62007612-62009611 Solanum lycopersicum
Solyc10g080810.1 5.0kb upstream 5.0kb upstream 10126 true SL2.50ch10: 61997486-62007611 Solanum lycopersicum
Solyc10g080810.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 61997486-62002485 Solanum lycopersicum
Solyc10g080810.1 5.0kb downstream 5.0kb downstream 10126 true SL2.50ch10: 62002486-62012611 Solanum lycopersicum
Solyc10g080810.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 62007612-62012611 Solanum lycopersicum
Solyc10g080810.1 10.0kb upstream 10.0kb upstream 15126 true SL2.50ch10: 61992486-62007611 Solanum lycopersicum
Solyc10g080810.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 61992486-62002485 Solanum lycopersicum
Solyc10g080810.1 10.0kb downstream 10.0kb downstream 15126 true SL2.50ch10: 62002486-62017611 Solanum lycopersicum
Solyc10g080810.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 62007612-62017611 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469173 5263 Asterids View MSA
123737894 5271 Pentapetalae View MSA
122788479 5272 Eudicot View MSA
122046571 5273 Angiosperm View MSA
121349564 5274 Embryophyte View MSA
123424365 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain