Gene : Solyc10g079730.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K06677 - condensin complex subunit 1 (YCS4, CNAP1, CAPD2) Description:  Condensin complex subunit 1 (AHRD V1 ***- B9H949_POPTR); contains Interpro domain(s) IPR007673 Non-SMC condensin subunit, XCAP-D2/Cnd1
Genomic Order:  1942 Name:  ? Solyc10g079730.1
Secondary Identifier:  ? PAC:36156064
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g079730.1 0.5kb upstream 0.5kb upstream 12898 true SL2.50ch10: 61224600-61237497 Solanum lycopersicum
Solyc10g079730.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 61236998-61237497 Solanum lycopersicum
Solyc10g079730.1 0.5kb downstream 0.5kb downstream 12898 true SL2.50ch10: 61224100-61236997 Solanum lycopersicum
Solyc10g079730.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 61224100-61224599 Solanum lycopersicum
Solyc10g079730.1 1.0kb upstream 1.0kb upstream 13398 true SL2.50ch10: 61224600-61237997 Solanum lycopersicum
Solyc10g079730.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 61236998-61237997 Solanum lycopersicum
Solyc10g079730.1 1.0kb downstream 1.0kb downstream 13398 true SL2.50ch10: 61223600-61236997 Solanum lycopersicum
Solyc10g079730.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 61223600-61224599 Solanum lycopersicum
Solyc10g079730.1 2.0kb upstream 2.0kb upstream 14398 true SL2.50ch10: 61224600-61238997 Solanum lycopersicum
Solyc10g079730.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 61236998-61238997 Solanum lycopersicum
Solyc10g079730.1 2.0kb downstream 2.0kb downstream 14398 true SL2.50ch10: 61222600-61236997 Solanum lycopersicum
Solyc10g079730.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 61222600-61224599 Solanum lycopersicum
Solyc10g079730.1 5.0kb upstream 5.0kb upstream 17398 true SL2.50ch10: 61224600-61241997 Solanum lycopersicum
Solyc10g079730.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 61236998-61241997 Solanum lycopersicum
Solyc10g079730.1 5.0kb downstream 5.0kb downstream 17398 true SL2.50ch10: 61219600-61236997 Solanum lycopersicum
Solyc10g079730.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 61219600-61224599 Solanum lycopersicum
Solyc10g079730.1 10.0kb upstream 10.0kb upstream 22398 true SL2.50ch10: 61224600-61246997 Solanum lycopersicum
Solyc10g079730.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 61236998-61246997 Solanum lycopersicum
Solyc10g079730.1 10.0kb downstream 10.0kb downstream 22398 true SL2.50ch10: 61214600-61236997 Solanum lycopersicum
Solyc10g079730.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 61214600-61224599 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468661 5263 Asterids View MSA
123737638 5271 Pentapetalae View MSA
122792109 5272 Eudicot View MSA
122042219 5273 Angiosperm View MSA
121346287 5274 Embryophyte View MSA
123424305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain