Gene : Solyc10g080640.1 S. lycopersicum ITAG2.4

Defline:  (1 of 4) PTHR31250:SF4 - CALMODULIN-BINDING FAMILY PROTEIN-RELATED Description:  Calmodulin binding protein (AHRD V1 *--* B6U0B7_MAIZE)
Genomic Order:  2033 Name:  ? Solyc10g080640.1
Secondary Identifier:  ? PAC:36155805

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g080640.1 0.5kb upstream 0.5kb upstream 3403 true SL2.50ch10: 61875462-61878864 Solanum lycopersicum
Solyc10g080640.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 61875462-61875961 Solanum lycopersicum
Solyc10g080640.1 0.5kb downstream 0.5kb downstream 3403 true SL2.50ch10: 61875962-61879364 Solanum lycopersicum
Solyc10g080640.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 61878865-61879364 Solanum lycopersicum
Solyc10g080640.1 1.0kb upstream 1.0kb upstream 3903 true SL2.50ch10: 61874962-61878864 Solanum lycopersicum
Solyc10g080640.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 61874962-61875961 Solanum lycopersicum
Solyc10g080640.1 1.0kb downstream 1.0kb downstream 3903 true SL2.50ch10: 61875962-61879864 Solanum lycopersicum
Solyc10g080640.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 61878865-61879864 Solanum lycopersicum
Solyc10g080640.1 2.0kb upstream 2.0kb upstream 4903 true SL2.50ch10: 61873962-61878864 Solanum lycopersicum
Solyc10g080640.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 61873962-61875961 Solanum lycopersicum
Solyc10g080640.1 2.0kb downstream 2.0kb downstream 4903 true SL2.50ch10: 61875962-61880864 Solanum lycopersicum
Solyc10g080640.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 61878865-61880864 Solanum lycopersicum
Solyc10g080640.1 5.0kb upstream 5.0kb upstream 7903 true SL2.50ch10: 61870962-61878864 Solanum lycopersicum
Solyc10g080640.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 61870962-61875961 Solanum lycopersicum
Solyc10g080640.1 5.0kb downstream 5.0kb downstream 7903 true SL2.50ch10: 61875962-61883864 Solanum lycopersicum
Solyc10g080640.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 61878865-61883864 Solanum lycopersicum
Solyc10g080640.1 10.0kb upstream 10.0kb upstream 12903 true SL2.50ch10: 61865962-61878864 Solanum lycopersicum
Solyc10g080640.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 61865962-61875961 Solanum lycopersicum
Solyc10g080640.1 10.0kb downstream 10.0kb downstream 12903 true SL2.50ch10: 61875962-61888864 Solanum lycopersicum
Solyc10g080640.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 61878865-61888864 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471116 5263 Asterids View MSA
123737438 5271 Pentapetalae View MSA
122795644 5272 Eudicot View MSA
122045965 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain