Gene : Solyc10g080660.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11960:SF18 - 4EHP, ISOFORM B Description:  Eukaryotic translation initiation factor 4E (AHRD V1 ***- A6XJR1_PIG); contains Interpro domain(s) IPR001040 Eukaryotic translation initiation factor 4E (eIF-4E)
Genomic Order:  2035 Name:  ? Solyc10g080660.1
Secondary Identifier:  ? PAC:36154853
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g080660.1 0.5kb upstream 0.5kb upstream 4040 true SL2.50ch10: 61883914-61887953 Solanum lycopersicum
Solyc10g080660.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 61887454-61887953 Solanum lycopersicum
Solyc10g080660.1 0.5kb downstream 0.5kb downstream 4040 true SL2.50ch10: 61883414-61887453 Solanum lycopersicum
Solyc10g080660.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 61883414-61883913 Solanum lycopersicum
Solyc10g080660.1 1.0kb upstream 1.0kb upstream 4540 true SL2.50ch10: 61883914-61888453 Solanum lycopersicum
Solyc10g080660.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 61887454-61888453 Solanum lycopersicum
Solyc10g080660.1 1.0kb downstream 1.0kb downstream 4540 true SL2.50ch10: 61882914-61887453 Solanum lycopersicum
Solyc10g080660.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 61882914-61883913 Solanum lycopersicum
Solyc10g080660.1 2.0kb upstream 2.0kb upstream 5540 true SL2.50ch10: 61883914-61889453 Solanum lycopersicum
Solyc10g080660.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 61887454-61889453 Solanum lycopersicum
Solyc10g080660.1 2.0kb downstream 2.0kb downstream 5540 true SL2.50ch10: 61881914-61887453 Solanum lycopersicum
Solyc10g080660.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 61881914-61883913 Solanum lycopersicum
Solyc10g080660.1 5.0kb upstream 5.0kb upstream 8540 true SL2.50ch10: 61883914-61892453 Solanum lycopersicum
Solyc10g080660.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 61887454-61892453 Solanum lycopersicum
Solyc10g080660.1 5.0kb downstream 5.0kb downstream 8540 true SL2.50ch10: 61878914-61887453 Solanum lycopersicum
Solyc10g080660.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 61878914-61883913 Solanum lycopersicum
Solyc10g080660.1 10.0kb upstream 10.0kb upstream 13540 true SL2.50ch10: 61883914-61897453 Solanum lycopersicum
Solyc10g080660.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 61887454-61897453 Solanum lycopersicum
Solyc10g080660.1 10.0kb downstream 10.0kb downstream 13540 true SL2.50ch10: 61873914-61887453 Solanum lycopersicum
Solyc10g080660.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 61873914-61883913 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480527 5263 Asterids View MSA
123751569 5271 Pentapetalae View MSA
122785682 5272 Eudicot View MSA
122047051 5273 Angiosperm View MSA
121344049 5274 Embryophyte View MSA
123379965 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain