Gene : Solyc10g080420.1 S. lycopersicum ITAG2.4
Defline:  (1 of 14) PF00168//PF08372 - C2 domain (C2) // Plant phosphoribosyltransferase C-terminal (PRT_C) Description:  Phosphoribosyltransferase (Fragment) (AHRD V1 *--- Q8LSY7_SEQSE); contains Interpro domain(s) IPR013583 Phosphoribosyltransferase C-terminal, plant
Genomic Order:  2011 Name:  ? Solyc10g080420.1
Secondary Identifier:  ? PAC:36155948
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g080420.1 0.5kb upstream 0.5kb upstream 2828 true SL2.50ch10: 61699507-61702334 Solanum lycopersicum
Solyc10g080420.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 61699507-61700006 Solanum lycopersicum
Solyc10g080420.1 0.5kb downstream 0.5kb downstream 2828 true SL2.50ch10: 61700007-61702834 Solanum lycopersicum
Solyc10g080420.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 61702335-61702834 Solanum lycopersicum
Solyc10g080420.1 1.0kb upstream 1.0kb upstream 3328 true SL2.50ch10: 61699007-61702334 Solanum lycopersicum
Solyc10g080420.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 61699007-61700006 Solanum lycopersicum
Solyc10g080420.1 1.0kb downstream 1.0kb downstream 3328 true SL2.50ch10: 61700007-61703334 Solanum lycopersicum
Solyc10g080420.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 61702335-61703334 Solanum lycopersicum
Solyc10g080420.1 2.0kb upstream 2.0kb upstream 4328 true SL2.50ch10: 61698007-61702334 Solanum lycopersicum
Solyc10g080420.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 61698007-61700006 Solanum lycopersicum
Solyc10g080420.1 2.0kb downstream 2.0kb downstream 4328 true SL2.50ch10: 61700007-61704334 Solanum lycopersicum
Solyc10g080420.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 61702335-61704334 Solanum lycopersicum
Solyc10g080420.1 5.0kb upstream 5.0kb upstream 7328 true SL2.50ch10: 61695007-61702334 Solanum lycopersicum
Solyc10g080420.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 61695007-61700006 Solanum lycopersicum
Solyc10g080420.1 5.0kb downstream 5.0kb downstream 7328 true SL2.50ch10: 61700007-61707334 Solanum lycopersicum
Solyc10g080420.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 61702335-61707334 Solanum lycopersicum
Solyc10g080420.1 10.0kb upstream 10.0kb upstream 12328 true SL2.50ch10: 61690007-61702334 Solanum lycopersicum
Solyc10g080420.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 61690007-61700006 Solanum lycopersicum
Solyc10g080420.1 10.0kb downstream 10.0kb downstream 12328 true SL2.50ch10: 61700007-61712334 Solanum lycopersicum
Solyc10g080420.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 61702335-61712334 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121389893 5263 Asterids View MSA
123751578 5271 Pentapetalae View MSA
122793897 5272 Eudicot View MSA
122046174 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain