Gene : Solyc10g080440.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K16810 - TBCC domain-containing protein 1 (TBCCD1) Description:  TBCC domain-containing protein 1 (AHRD V1 ***- TBCC1_XENTR); contains Interpro domain(s) IPR012945 Tubulin binding cofactor C
Genomic Order:  2013 Name:  ? Solyc10g080440.1
Secondary Identifier:  ? PAC:36155536
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g080440.1 0.5kb upstream 0.5kb upstream 9894 true SL2.50ch10: 61711090-61720983 Solanum lycopersicum
Solyc10g080440.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 61711090-61711589 Solanum lycopersicum
Solyc10g080440.1 0.5kb downstream 0.5kb downstream 9894 true SL2.50ch10: 61711590-61721483 Solanum lycopersicum
Solyc10g080440.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 61720984-61721483 Solanum lycopersicum
Solyc10g080440.1 1.0kb upstream 1.0kb upstream 10394 true SL2.50ch10: 61710590-61720983 Solanum lycopersicum
Solyc10g080440.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 61710590-61711589 Solanum lycopersicum
Solyc10g080440.1 1.0kb downstream 1.0kb downstream 10394 true SL2.50ch10: 61711590-61721983 Solanum lycopersicum
Solyc10g080440.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 61720984-61721983 Solanum lycopersicum
Solyc10g080440.1 2.0kb upstream 2.0kb upstream 11394 true SL2.50ch10: 61709590-61720983 Solanum lycopersicum
Solyc10g080440.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 61709590-61711589 Solanum lycopersicum
Solyc10g080440.1 2.0kb downstream 2.0kb downstream 11394 true SL2.50ch10: 61711590-61722983 Solanum lycopersicum
Solyc10g080440.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 61720984-61722983 Solanum lycopersicum
Solyc10g080440.1 5.0kb upstream 5.0kb upstream 14394 true SL2.50ch10: 61706590-61720983 Solanum lycopersicum
Solyc10g080440.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 61706590-61711589 Solanum lycopersicum
Solyc10g080440.1 5.0kb downstream 5.0kb downstream 14394 true SL2.50ch10: 61711590-61725983 Solanum lycopersicum
Solyc10g080440.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 61720984-61725983 Solanum lycopersicum
Solyc10g080440.1 10.0kb upstream 10.0kb upstream 19394 true SL2.50ch10: 61701590-61720983 Solanum lycopersicum
Solyc10g080440.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 61701590-61711589 Solanum lycopersicum
Solyc10g080440.1 10.0kb downstream 10.0kb downstream 19394 true SL2.50ch10: 61711590-61730983 Solanum lycopersicum
Solyc10g080440.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 61720984-61730983 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468586 5263 Asterids View MSA
123737607 5271 Pentapetalae View MSA
122797393 5272 Eudicot View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain