Gene : Solyc10g084050.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) Description:  26S protease regulatory subunit 6B homolog (AHRD V1 *--- PRS6B_ARATH); contains Interpro domain(s) IPR005938 ATPase, AAA-type, CDC48
Genomic Order:  2272 Name:  ? Solyc10g084050.1
Secondary Identifier:  ? PAC:36156238
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g084050.1 0.5kb upstream 0.5kb upstream 5377 true SL2.50ch10: 63723933-63729309 Solanum lycopersicum
Solyc10g084050.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 63723933-63724432 Solanum lycopersicum
Solyc10g084050.1 0.5kb downstream 0.5kb downstream 5377 true SL2.50ch10: 63724433-63729809 Solanum lycopersicum
Solyc10g084050.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 63729310-63729809 Solanum lycopersicum
Solyc10g084050.1 1.0kb upstream 1.0kb upstream 5877 true SL2.50ch10: 63723433-63729309 Solanum lycopersicum
Solyc10g084050.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 63723433-63724432 Solanum lycopersicum
Solyc10g084050.1 1.0kb downstream 1.0kb downstream 5877 true SL2.50ch10: 63724433-63730309 Solanum lycopersicum
Solyc10g084050.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 63729310-63730309 Solanum lycopersicum
Solyc10g084050.1 2.0kb upstream 2.0kb upstream 6877 true SL2.50ch10: 63722433-63729309 Solanum lycopersicum
Solyc10g084050.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 63722433-63724432 Solanum lycopersicum
Solyc10g084050.1 2.0kb downstream 2.0kb downstream 6877 true SL2.50ch10: 63724433-63731309 Solanum lycopersicum
Solyc10g084050.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 63729310-63731309 Solanum lycopersicum
Solyc10g084050.1 5.0kb upstream 5.0kb upstream 9877 true SL2.50ch10: 63719433-63729309 Solanum lycopersicum
Solyc10g084050.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 63719433-63724432 Solanum lycopersicum
Solyc10g084050.1 5.0kb downstream 5.0kb downstream 9877 true SL2.50ch10: 63724433-63734309 Solanum lycopersicum
Solyc10g084050.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 63729310-63734309 Solanum lycopersicum
Solyc10g084050.1 10.0kb upstream 10.0kb upstream 14877 true SL2.50ch10: 63714433-63729309 Solanum lycopersicum
Solyc10g084050.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 63714433-63724432 Solanum lycopersicum
Solyc10g084050.1 10.0kb downstream 10.0kb downstream 14877 true SL2.50ch10: 63724433-63739309 Solanum lycopersicum
Solyc10g084050.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 63729310-63739309 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479765 5263 Asterids View MSA
123746983 5271 Pentapetalae View MSA
122795799 5272 Eudicot View MSA
122048605 5273 Angiosperm View MSA
121347913 5274 Embryophyte View MSA
123424841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain