Gene : Solyc10g084990.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR21290//PTHR21290:SF29 - SPHINGOMYELIN SYNTHETASE // SUBFAMILY NOT NAMED Description:  Phosphatidylcholine:ceramide cholinephosphotransferase 1 (AHRD V1 *--- SMS1_RAT)
Genomic Order:  2366 Name:  ? Solyc10g084990.1
Secondary Identifier:  ? PAC:36156179
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g084990.1 0.5kb upstream 0.5kb upstream 3855 true SL2.50ch10: 64336419-64340273 Solanum lycopersicum
Solyc10g084990.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 64336419-64336918 Solanum lycopersicum
Solyc10g084990.1 0.5kb downstream 0.5kb downstream 3855 true SL2.50ch10: 64336919-64340773 Solanum lycopersicum
Solyc10g084990.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 64340274-64340773 Solanum lycopersicum
Solyc10g084990.1 1.0kb upstream 1.0kb upstream 4355 true SL2.50ch10: 64335919-64340273 Solanum lycopersicum
Solyc10g084990.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 64335919-64336918 Solanum lycopersicum
Solyc10g084990.1 1.0kb downstream 1.0kb downstream 4355 true SL2.50ch10: 64336919-64341273 Solanum lycopersicum
Solyc10g084990.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 64340274-64341273 Solanum lycopersicum
Solyc10g084990.1 2.0kb upstream 2.0kb upstream 5355 true SL2.50ch10: 64334919-64340273 Solanum lycopersicum
Solyc10g084990.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 64334919-64336918 Solanum lycopersicum
Solyc10g084990.1 2.0kb downstream 2.0kb downstream 5355 true SL2.50ch10: 64336919-64342273 Solanum lycopersicum
Solyc10g084990.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 64340274-64342273 Solanum lycopersicum
Solyc10g084990.1 5.0kb upstream 5.0kb upstream 8355 true SL2.50ch10: 64331919-64340273 Solanum lycopersicum
Solyc10g084990.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 64331919-64336918 Solanum lycopersicum
Solyc10g084990.1 5.0kb downstream 5.0kb downstream 8355 true SL2.50ch10: 64336919-64345273 Solanum lycopersicum
Solyc10g084990.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 64340274-64345273 Solanum lycopersicum
Solyc10g084990.1 10.0kb upstream 10.0kb upstream 13355 true SL2.50ch10: 64326919-64340273 Solanum lycopersicum
Solyc10g084990.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 64326919-64336918 Solanum lycopersicum
Solyc10g084990.1 10.0kb downstream 10.0kb downstream 13355 true SL2.50ch10: 64336919-64350273 Solanum lycopersicum
Solyc10g084990.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 64340274-64350273 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121384901 5263 Asterids View MSA
123744784 5271 Pentapetalae View MSA
122788943 5272 Eudicot View MSA
122046269 5273 Angiosperm View MSA
121346433 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain