Gene : Solyc10g083170.1 S. lycopersicum ITAG2.4
Defline:  (1 of 9) 1.1.1.331 - Secoisolariciresinol dehydrogenase Description:  2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase (AHRD V1 **** LINC_PSEPA); contains Interpro domain(s) IPR002347 Glucose/ribitol dehydrogenase
Genomic Order:  2185 Name:  ? Solyc10g083170.1
Secondary Identifier:  ? PAC:36154308
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5466 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g083170.1 0.5kb upstream 0.5kb upstream 2474 true SL2.50ch10: 63039551-63042024 Solanum lycopersicum
Solyc10g083170.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 63041525-63042024 Solanum lycopersicum
Solyc10g083170.1 0.5kb downstream 0.5kb downstream 2474 true SL2.50ch10: 63039051-63041524 Solanum lycopersicum
Solyc10g083170.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 63039051-63039550 Solanum lycopersicum
Solyc10g083170.1 1.0kb upstream 1.0kb upstream 2974 true SL2.50ch10: 63039551-63042524 Solanum lycopersicum
Solyc10g083170.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 63041525-63042524 Solanum lycopersicum
Solyc10g083170.1 1.0kb downstream 1.0kb downstream 2974 true SL2.50ch10: 63038551-63041524 Solanum lycopersicum
Solyc10g083170.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 63038551-63039550 Solanum lycopersicum
Solyc10g083170.1 2.0kb upstream 2.0kb upstream 3974 true SL2.50ch10: 63039551-63043524 Solanum lycopersicum
Solyc10g083170.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 63041525-63043524 Solanum lycopersicum
Solyc10g083170.1 2.0kb downstream 2.0kb downstream 3974 true SL2.50ch10: 63037551-63041524 Solanum lycopersicum
Solyc10g083170.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 63037551-63039550 Solanum lycopersicum
Solyc10g083170.1 5.0kb upstream 5.0kb upstream 6974 true SL2.50ch10: 63039551-63046524 Solanum lycopersicum
Solyc10g083170.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 63041525-63046524 Solanum lycopersicum
Solyc10g083170.1 5.0kb downstream 5.0kb downstream 6974 true SL2.50ch10: 63034551-63041524 Solanum lycopersicum
Solyc10g083170.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 63034551-63039550 Solanum lycopersicum
Solyc10g083170.1 10.0kb upstream 10.0kb upstream 11974 true SL2.50ch10: 63039551-63051524 Solanum lycopersicum
Solyc10g083170.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 63041525-63051524 Solanum lycopersicum
Solyc10g083170.1 10.0kb downstream 10.0kb downstream 11974 true SL2.50ch10: 63029551-63041524 Solanum lycopersicum
Solyc10g083170.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 63029551-63039550 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475995 5263 Asterids View MSA
123749022 5271 Pentapetalae View MSA
122797133 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain