Gene : Solyc10g083590.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Description:  Pre-mRNA cleavage complex 2 protein Pcf11 (AHRD V1 *--- D3PJ70_9MAXI); contains Interpro domain(s) IPR008942 ENTH/VHS
Genomic Order:  2227 Name:  ? Solyc10g083590.1
Secondary Identifier:  ? PAC:36156156
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g083590.1 0.5kb upstream 0.5kb upstream 11527 true SL2.50ch10: 63369833-63381359 Solanum lycopersicum
Solyc10g083590.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 63380860-63381359 Solanum lycopersicum
Solyc10g083590.1 0.5kb downstream 0.5kb downstream 11527 true SL2.50ch10: 63369333-63380859 Solanum lycopersicum
Solyc10g083590.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 63369333-63369832 Solanum lycopersicum
Solyc10g083590.1 1.0kb upstream 1.0kb upstream 12027 true SL2.50ch10: 63369833-63381859 Solanum lycopersicum
Solyc10g083590.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 63380860-63381859 Solanum lycopersicum
Solyc10g083590.1 1.0kb downstream 1.0kb downstream 12027 true SL2.50ch10: 63368833-63380859 Solanum lycopersicum
Solyc10g083590.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 63368833-63369832 Solanum lycopersicum
Solyc10g083590.1 2.0kb upstream 2.0kb upstream 13027 true SL2.50ch10: 63369833-63382859 Solanum lycopersicum
Solyc10g083590.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 63380860-63382859 Solanum lycopersicum
Solyc10g083590.1 2.0kb downstream 2.0kb downstream 13027 true SL2.50ch10: 63367833-63380859 Solanum lycopersicum
Solyc10g083590.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 63367833-63369832 Solanum lycopersicum
Solyc10g083590.1 5.0kb upstream 5.0kb upstream 16027 true SL2.50ch10: 63369833-63385859 Solanum lycopersicum
Solyc10g083590.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 63380860-63385859 Solanum lycopersicum
Solyc10g083590.1 5.0kb downstream 5.0kb downstream 16027 true SL2.50ch10: 63364833-63380859 Solanum lycopersicum
Solyc10g083590.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 63364833-63369832 Solanum lycopersicum
Solyc10g083590.1 10.0kb upstream 10.0kb upstream 21027 true SL2.50ch10: 63369833-63390859 Solanum lycopersicum
Solyc10g083590.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 63380860-63390859 Solanum lycopersicum
Solyc10g083590.1 10.0kb downstream 10.0kb downstream 21027 true SL2.50ch10: 63359833-63380859 Solanum lycopersicum
Solyc10g083590.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 63359833-63369832 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478165 5263 Asterids View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain