Gene : Solyc10g083550.1 S. lycopersicum ITAG2.4
Defline:  (1 of 10) 6.3.1.2 - Glutamate--ammonia ligase / Glutamine synthetase Description:  Glutamine synthetase I (AHRD V1 ***- Q9SC91_MEDTR); contains Interpro domain(s) IPR008146 Glutamine synthetase, catalytic region
Genomic Order:  2223 Name:  ? Solyc10g083550.1
Secondary Identifier:  ? PAC:36154958
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLNSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-3282 Solanum lycopersicum pathologic  
Slycopersicum PWY-381 Solanum lycopersicum pathologic  
Slycopersicum PWY-6549 Solanum lycopersicum pathologic  
Slycopersicum PWY-6963 Solanum lycopersicum pathologic  
Slycopersicum PWY-6964 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g083550.1 0.5kb upstream 0.5kb upstream 3948 true SL2.50ch10: 63331706-63335653 Solanum lycopersicum
Solyc10g083550.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 63331706-63332205 Solanum lycopersicum
Solyc10g083550.1 0.5kb downstream 0.5kb downstream 3948 true SL2.50ch10: 63332206-63336153 Solanum lycopersicum
Solyc10g083550.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 63335654-63336153 Solanum lycopersicum
Solyc10g083550.1 1.0kb upstream 1.0kb upstream 4448 true SL2.50ch10: 63331206-63335653 Solanum lycopersicum
Solyc10g083550.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 63331206-63332205 Solanum lycopersicum
Solyc10g083550.1 1.0kb downstream 1.0kb downstream 4448 true SL2.50ch10: 63332206-63336653 Solanum lycopersicum
Solyc10g083550.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 63335654-63336653 Solanum lycopersicum
Solyc10g083550.1 2.0kb upstream 2.0kb upstream 5448 true SL2.50ch10: 63330206-63335653 Solanum lycopersicum
Solyc10g083550.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 63330206-63332205 Solanum lycopersicum
Solyc10g083550.1 2.0kb downstream 2.0kb downstream 5448 true SL2.50ch10: 63332206-63337653 Solanum lycopersicum
Solyc10g083550.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 63335654-63337653 Solanum lycopersicum
Solyc10g083550.1 5.0kb upstream 5.0kb upstream 8448 true SL2.50ch10: 63327206-63335653 Solanum lycopersicum
Solyc10g083550.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 63327206-63332205 Solanum lycopersicum
Solyc10g083550.1 5.0kb downstream 5.0kb downstream 8448 true SL2.50ch10: 63332206-63340653 Solanum lycopersicum
Solyc10g083550.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 63335654-63340653 Solanum lycopersicum
Solyc10g083550.1 10.0kb upstream 10.0kb upstream 13448 true SL2.50ch10: 63322206-63335653 Solanum lycopersicum
Solyc10g083550.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 63322206-63332205 Solanum lycopersicum
Solyc10g083550.1 10.0kb downstream 10.0kb downstream 13448 true SL2.50ch10: 63332206-63345653 Solanum lycopersicum
Solyc10g083550.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 63335654-63345653 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121386140 5263 Asterids View MSA
123749163 5271 Pentapetalae View MSA
122791802 5272 Eudicot View MSA
122046045 5273 Angiosperm View MSA
121348529 5274 Embryophyte View MSA
123428524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain