Gene : Solyc10g055710.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31618:SF1 - MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Description:  Mechanosensitive ion channel family (AHRD V1 *-*- B8LXW9_TALSN); contains Interpro domain(s) IPR016688 Membrane protein, At2g17000, predicted
Genomic Order:  1590 Name:  ? Solyc10g055710.1
Secondary Identifier:  ? PAC:36155524
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g055710.1 0.5kb upstream 0.5kb upstream 4948 true SL2.50ch10: 57240942-57245889 Solanum lycopersicum
Solyc10g055710.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 57245390-57245889 Solanum lycopersicum
Solyc10g055710.1 0.5kb downstream 0.5kb downstream 4948 true SL2.50ch10: 57240442-57245389 Solanum lycopersicum
Solyc10g055710.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 57240442-57240941 Solanum lycopersicum
Solyc10g055710.1 1.0kb upstream 1.0kb upstream 5448 true SL2.50ch10: 57240942-57246389 Solanum lycopersicum
Solyc10g055710.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 57245390-57246389 Solanum lycopersicum
Solyc10g055710.1 1.0kb downstream 1.0kb downstream 5448 true SL2.50ch10: 57239942-57245389 Solanum lycopersicum
Solyc10g055710.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 57239942-57240941 Solanum lycopersicum
Solyc10g055710.1 2.0kb upstream 2.0kb upstream 6448 true SL2.50ch10: 57240942-57247389 Solanum lycopersicum
Solyc10g055710.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 57245390-57247389 Solanum lycopersicum
Solyc10g055710.1 2.0kb downstream 2.0kb downstream 6448 true SL2.50ch10: 57238942-57245389 Solanum lycopersicum
Solyc10g055710.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 57238942-57240941 Solanum lycopersicum
Solyc10g055710.1 5.0kb upstream 5.0kb upstream 9448 true SL2.50ch10: 57240942-57250389 Solanum lycopersicum
Solyc10g055710.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 57245390-57250389 Solanum lycopersicum
Solyc10g055710.1 5.0kb downstream 5.0kb downstream 9448 true SL2.50ch10: 57235942-57245389 Solanum lycopersicum
Solyc10g055710.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 57235942-57240941 Solanum lycopersicum
Solyc10g055710.1 10.0kb upstream 10.0kb upstream 14448 true SL2.50ch10: 57240942-57255389 Solanum lycopersicum
Solyc10g055710.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 57245390-57255389 Solanum lycopersicum
Solyc10g055710.1 10.0kb downstream 10.0kb downstream 14448 true SL2.50ch10: 57230942-57245389 Solanum lycopersicum
Solyc10g055710.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 57230942-57240941 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476509 5263 Asterids View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain