Gene : Solyc10g078760.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PF03760 - Late embryogenesis abundant (LEA) group 1 (LEA_1) Description:  Seed maturation protein LEA 4 (AHRD V1 ***- Q941M2_9FABA); contains Interpro domain(s) IPR005513 Late embryogenesis abundant (LEA) group 1
Genomic Order:  1845 Name:  ? Solyc10g078760.1
Secondary Identifier:  ? PAC:36156017
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g078760.1 0.5kb upstream 0.5kb upstream 863 true SL2.50ch10: 60479339-60480201 Solanum lycopersicum
Solyc10g078760.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 60479702-60480201 Solanum lycopersicum
Solyc10g078760.1 0.5kb downstream 0.5kb downstream 863 true SL2.50ch10: 60478839-60479701 Solanum lycopersicum
Solyc10g078760.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 60478839-60479338 Solanum lycopersicum
Solyc10g078760.1 1.0kb upstream 1.0kb upstream 1363 true SL2.50ch10: 60479339-60480701 Solanum lycopersicum
Solyc10g078760.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 60479702-60480701 Solanum lycopersicum
Solyc10g078760.1 1.0kb downstream 1.0kb downstream 1363 true SL2.50ch10: 60478339-60479701 Solanum lycopersicum
Solyc10g078760.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 60478339-60479338 Solanum lycopersicum
Solyc10g078760.1 2.0kb upstream 2.0kb upstream 2363 true SL2.50ch10: 60479339-60481701 Solanum lycopersicum
Solyc10g078760.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 60479702-60481701 Solanum lycopersicum
Solyc10g078760.1 2.0kb downstream 2.0kb downstream 2363 true SL2.50ch10: 60477339-60479701 Solanum lycopersicum
Solyc10g078760.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 60477339-60479338 Solanum lycopersicum
Solyc10g078760.1 5.0kb upstream 5.0kb upstream 5363 true SL2.50ch10: 60479339-60484701 Solanum lycopersicum
Solyc10g078760.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 60479702-60484701 Solanum lycopersicum
Solyc10g078760.1 5.0kb downstream 5.0kb downstream 5363 true SL2.50ch10: 60474339-60479701 Solanum lycopersicum
Solyc10g078760.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 60474339-60479338 Solanum lycopersicum
Solyc10g078760.1 10.0kb upstream 10.0kb upstream 10363 true SL2.50ch10: 60479339-60489701 Solanum lycopersicum
Solyc10g078760.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 60479702-60489701 Solanum lycopersicum
Solyc10g078760.1 10.0kb downstream 10.0kb downstream 10363 true SL2.50ch10: 60469339-60479701 Solanum lycopersicum
Solyc10g078760.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 60469339-60479338 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479472 5263 Asterids View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain